GlyCosmos Portal

Submissions

carbohydrate kinase

Summary

Gene Symbol

SPOM_SPBC1861.05

Organism

Schizosaccharomyces pombe (fission yeast)

External Links

NCBI Gene: 2539763
PubChem: 2539763

Gene Ontology (GO)

Displaying **all 2** entries
GO Term	Evidence Code	PMID
pyrimidine nucleoside metabolic process	IC
phosphorylation

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

pyrimidine-containing compound metabolic process [inference]

pyrimidine nucleoside metabolic process

organonitrogen compound metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

pyrimidine-containing compound metabolic process [inference]

pyrimidine nucleoside metabolic process

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

phosphorus metabolic process [inference]

phosphate-containing compound metabolic process [inference]

phosphorylation

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

pyrimidine-containing compound metabolic process [inference]

pyrimidine nucleoside metabolic process

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

pyrimidine-containing compound metabolic process [inference]

pyrimidine nucleoside metabolic process

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

small molecule metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

organic substance metabolic process [inference]

carbohydrate derivative metabolic process [inference]

glycosyl compound metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

organic cyclic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

pyrimidine-containing compound metabolic process [inference]

pyrimidine nucleoside metabolic process

organonitrogen compound metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

pyrimidine-containing compound metabolic process [inference]

pyrimidine nucleoside metabolic process

cellular process [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

phosphorus metabolic process [inference]

phosphate-containing compound metabolic process [inference]

phosphorylation

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

pyrimidine-containing compound metabolic process [inference]

pyrimidine nucleoside metabolic process

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleoside metabolic process [inference]

pyrimidine nucleoside metabolic process

pyrimidine-containing compound metabolic process [inference]

pyrimidine nucleoside metabolic process

Displaying **all 2** entries
GO Term	Evidence Code	PMID
cytoplasm	IBA
cytoplasm	HDA	16823372

GO Hierarchy

cellular component

cellular anatomical entity [inference]

cytoplasm

Displaying **all 5** entries
GO Term	Evidence Code	PMID
pseudouridylate synthase activity	IBA
ATP binding	IEA
hydrolase activity, acting on glycosyl bonds
metal ion binding
pseudouridine kinase activity	ISS

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

transferase activity, transferring phosphorus-containing groups [inference]

kinase activity [inference]

pseudouridine kinase activity

phosphotransferase activity, alcohol group as acceptor [inference]

pseudouridine kinase activity

hydrolase activity [inference]

hydrolase activity, acting on glycosyl bonds

lyase activity [inference]

carbon-oxygen lyase activity [inference]

hydro-lyase activity [inference]

pseudouridylate synthase activity

binding [inference]

small molecule binding [inference]

heterocyclic compound binding [inference]

nucleotide binding [inference]

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ion binding [inference]

anion binding [inference]

purine ribonucleoside triphosphate binding [inference]

ATP binding

cation binding [inference]

metal ion binding

organic cyclic compound binding [inference]

nucleoside phosphate binding [inference]

nucleotide binding [inference]

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleoside triphosphate binding [inference]

ATP binding

carbohydrate derivative binding [inference]

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Pseudouridine-metabolizing bifunctional protein

Functional Category

E: Amino acid transport and metabolism
G: Carbohydrate transport and metabolism
Q: Secondary metabolites biosynthesis, transport and catabolism
T: Signal transduction mechanisms

Displaying **all 6** entries
Gene Ontology
hydrolase activity, acting on glycosyl bonds
hydrolase activity
lyase activity
metal ion binding
pseudouridine synthesis
pseudouridylate synthase activity

Displaying **all 4** entries
InterPro
Carbohydrate kinase PfkB
Indigoidine synthase A-like
Pseudouridine-5'-phosphate glycosidase
Ribokinase-like

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

GlyCosmos Portal v4.5.0

Last updated: April 6, 2026

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

OrthoDB (Group)

International Collaboration

Acknowledgements