Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
syndecan 2
Summary
- Gene Symbol
-
- Sdc2
- Organism
- Rattus norvegicus (Norway rat)
Annotation
- Keyword
-
- Differentiation
- Heparan sulfate
- Neurogenesis
- Phosphoprotein
- Reference proteome
- Signal
- Transmembrane helix
- Proteins
| UniProt | Protein Name |
|---|---|
| Q6IRK3 |
|
| P34900 |
|
| A0A9K3Y7Q3 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| response to hypoxia | ||
| positive regulation of epithelial cell migration | ||
| cell migration | ||
| response to caffeine | ||
| positive regulation of cell adhesion |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| plasma membrane | ||
| plasma membrane | ||
| plasma membrane | ||
| cell surface | ||
| membrane |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| PDZ domain binding | ||
| PDZ domain binding | ||
| PDZ domain binding | ||
| identical protein binding |
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- Syndecan
- Functional Category
-
- E: Amino acid transport and metabolism
- O: Posttranslational modification, protein turnover, chaperones
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| cell migration |
| InterPro |
|---|
| Neurexin/syndecan/glycophorin C |
| Syndecan, conserved site |
| Syndecan/Neurexin domain |
| Syndecan |
Alliance of Genome Resources
- Expression
| Location | References |
|---|---|
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 6382 | FB:FBgn0010415 | ||
| 6383 | ZFIN:ZDB-GENE-021206-3 | HUMAN94827 | |
| 6385 | FB:FBgn0010415 | ||
| 9672 | FB:FBgn0010415 | ||
| 15529 | ZFIN:ZDB-GENE-021206-3 | MOUSE15785 | |
| 20969 | FB:FBgn0010415 | ||
| 20970 | FB:FBgn0010415 | ||
| 20971 | FB:FBgn0010415 | ||
| 24771 | FB:FBgn0010415 | ||
| 25216 | FB:FBgn0010415 |
