GlyCosmos Portal

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GO Term	Evidence Code	PMID
transcription cis-regulatory region binding	IDA	9566909
RNA polymerase II transcription regulatory region sequence-specific DNA binding	IGI	21330551
RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	21220346
RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
DNA-binding transcription factor activity, RNA polymerase II-specific	ISA

GO Hierarchy

molecular function

binding [inference]

protein binding

transcription factor binding [inference]

DNA-binding transcription factor binding [inference]

RNA polymerase II-specific DNA-binding transcription factor binding

NFAT protein binding

enzyme binding [inference]

kinase binding [inference]

protein kinase binding

SMAD binding [inference]

co-SMAD binding

ion binding [inference]

cation binding [inference]

metal ion binding [inference]

transition metal ion binding [inference]

zinc ion binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

transcription regulatory region nucleic acid binding [inference]

transcription cis-regulatory region binding

RNA polymerase II transcription regulatory region sequence-specific DNA binding

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

DNA binding

double-stranded DNA binding [inference]

sequence-specific double-stranded DNA binding

transcription cis-regulatory region binding

RNA polymerase II transcription regulatory region sequence-specific DNA binding

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

sequence-specific DNA binding

sequence-specific double-stranded DNA binding

transcription cis-regulatory region binding

RNA polymerase II transcription regulatory region sequence-specific DNA binding

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

transcription regulator activity [inference]

DNA-binding transcription factor activity

DNA-binding transcription factor activity, RNA polymerase II-specific

DNA-binding transcription activator activity, RNA polymerase II-specific

DNA-binding transcription activator activity

DNA-binding transcription activator activity, RNA polymerase II-specific

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

GATA-binding factor

Functional Category

E: Amino acid transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 3** entries
Gene Ontology
metal ion binding
sequence-specific DNA binding
zinc ion binding

Displaying **all 3** entries
InterPro
Transcription factor GATA
Zinc finger, GATA-type
Zinc finger, NHR/GATA-type

Disease

Disease Ontology

Displaying **all 6** entries
DO ID	Disease Name	Source
DOID:0050651	atrioventricular septal defect	Alliance of Genome Resources
DOID:0110107	atrial heart septal defect 2	Alliance of Genome Resources
DOID:1657	ventricular septal defect	Alliance of Genome Resources
DOID:1682	congenital heart disease	Alliance of Genome Resources
DOID:1882	atrial heart septal defect	Alliance of Genome Resources
DOID:6419	tetralogy of Fallot	Alliance of Genome Resources

Ortholog

Displaying entries **1 - 10** of 69 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Saccharomyces cerevisiae S288C	2624	SGD:S000001873
Saccharomyces cerevisiae S288C	2625	SGD:S000003646
Xenopus tropicalis	2626	Xenbase:XB-GENE-487458
Mus musculus	14463	Xenbase:XB-GENE-487458	MOUSE12668
Danio rerio	30483		DANRE20015
Rattus norvegicus	54254		RATNO09580
Bos taurus	327716		BOVIN34139
Sus scrofa	397555		PIGXX06530
Pan troglodytes	472698		PANTR41977
Canis lupus familiaris	486079		CANLF09930

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

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Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements