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Repository for lectin-assisted multimodality data
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MIRAGE
collagen type I alpha 1 chain
Summary
- Gene Symbol
-
- Col1a1
- Organism
- Rattus norvegicus (Norway rat)
Annotation
- Keyword
-
- 3D-structure
- Calcium
- Collagen
- Direct protein sequencing
- Disulfide bond
- Extracellular matrix
- Glycoprotein
- Hydroxylation
- Metal-binding
- Phosphoprotein
- Pyrrolidone carboxylic acid
- Reference proteome
- Repeat
- Signal
- Proteins
| UniProt | Protein Name |
|---|---|
| P02454 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| skeletal system development | ||
| skeletal system development | ||
| ossification | ||
| ossification | ||
| blood vessel development |
GO Hierarchy
biological process
cellular process [inference]
response to stimulus [inference]
response to endogenous stimulus [inference]
response to chemical [inference]
cellular response to stimulus [inference]
biological regulation [inference]
regulation of biological process [inference]
regulation of metabolic process [inference]
positive regulation of biological process [inference]
regulation of cellular process [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| extracellular region | ||
| extracellular region | ||
| collagen trimer | ||
| collagen trimer | ||
| collagen type I trimer |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protease binding | ||
| extracellular matrix structural constituent | ||
| extracellular matrix structural constituent | ||
| protein binding | ||
| extracellular matrix structural constituent conferring tensile strength |
GO Hierarchy
OrthoDB (Group)
- Group level
- Rodentia
- Group Name
- collagen alpha-1(I) chain
- Functional Category
-
- O: Posttranslational modification, protein turnover, chaperones
- P: Inorganic ion transport and metabolism
- Q: Secondary metabolites biosynthesis, transport and catabolism
| InterPro |
|---|
| Collagen triple helix repeat |
| Fibrillar collagen, C-terminal |
| VWFC domain |
Alliance of Genome Resources
- Expression
| Location | References |
|---|---|
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0080208 | metabolic dysfunction-associated steatotic liver disease | |
| DOID:13580 | cholestasis |
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 1277 | Xenbase:XB-GENE-6258379 | HUMAN34868 | |
| 12842 | Xenbase:XB-GENE-6258379 | MOUSE07210 | |
| 29393 | Xenbase:XB-GENE-6258379 | ||
| 282187 | BOVIN13067 | ||
| 337158 | DANRE31666 | ||
| 403651 | CANLF18887 | ||
| 443483 | SHEEP02923 | ||
| 574201 | MACMU14488 | ||
| 100019354 | MONDO10750 | ||
| 100079519 | ORNAN02408 |
