GlyCosmos Portal

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GO Term	Evidence Code	PMID
nucleus	IDA	12021283
RNA polymerase II, core complex	ISS	10908585
RNA polymerase II, core complex	IDA	12021283 6417125
RNA polymerase II, core complex	IBA
polytene chromosome	IDA	19936620

GO Hierarchy

cellular component

protein-containing complex [inference]

nuclear protein-containing complex [inference]

nuclear DNA-directed RNA polymerase complex [inference]

RNA polymerase II, core complex

intracellular protein-containing complex [inference]

RNA polymerase complex [inference]

DNA-directed RNA polymerase complex [inference]

nuclear DNA-directed RNA polymerase complex [inference]

RNA polymerase II, core complex

catalytic complex [inference]

transferase complex [inference]

transferase complex, transferring phosphorus-containing groups [inference]

RNA polymerase complex [inference]

DNA-directed RNA polymerase complex [inference]

nuclear DNA-directed RNA polymerase complex [inference]

RNA polymerase II, core complex

cellular anatomical entity [inference]

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

non-membrane-bounded organelle [inference]

intracellular non-membrane-bounded organelle [inference]

chromosome [inference]

polytene chromosome

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular non-membrane-bounded organelle [inference]

chromosome [inference]

polytene chromosome

chromosomal region [inference]

polytene chromosome puff

Displaying entries **1 - 5** of 6 in total

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GO Term	Evidence Code	PMID
DNA binding	IEA
DNA-directed 5'-3' RNA polymerase activity	ISS	10908585
DNA-directed 5'-3' RNA polymerase activity	IDA	3131761 7498740
DNA-directed 5'-3' RNA polymerase activity	IBA
DNA-directed 5'-3' RNA polymerase activity	IEA

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

transferase activity, transferring phosphorus-containing groups [inference]

nucleotidyltransferase activity [inference]

RNA polymerase activity [inference]

5'-3' RNA polymerase activity [inference]

DNA-directed 5'-3' RNA polymerase activity

catalytic activity, acting on a nucleic acid [inference]

catalytic activity, acting on RNA [inference]

RNA polymerase activity [inference]

5'-3' RNA polymerase activity [inference]

DNA-directed 5'-3' RNA polymerase activity

binding [inference]

ion binding [inference]

cation binding [inference]

metal ion binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

DNA binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

DNA-directed RNA polymerase

Functional Category

G: Carbohydrate transport and metabolism
I: Lipid transport and metabolism
J: Translation, ribosomal structure and biogenesis

Displaying **all 2** entries
Gene Ontology
nucleotidyltransferase activity
transferase activity

Displaying **all 10** entries
InterPro
DNA-directed RNA polymerase, subunit beta-prime
RNA polymerase Rpb1, clamp domain superfamily
RNA polymerase Rpb1, domain 1
RNA polymerase Rpb1, domain 3 superfamily
RNA polymerase Rpb1, domain 3
RNA polymerase Rpb1, domain 4
RNA polymerase Rpb1, domain 5
RNA polymerase Rpb1, funnel domain superfamily
RNA polymerase, N-terminal
RNA polymerase, alpha subunit

Alliance of Genome Resources

Expression

Displaying **all 4** entries
Location	References
polytene chromosome puff	PMID:19921261 PMID:6095263 PMID:9632819
nucleus	PMID:12021283
polytene chromosome	PMID:19936620
RNA polymerase II, core complex	PMID:12021283 PMID:6417125

Ortholog

Displaying **all 3** entries
Species	Gene ID	Alliance of Genome Resources
Danio rerio	5430	ZFIN:ZDB-GENE-041008-78
Danio rerio	20020	ZFIN:ZDB-GENE-041008-78
Danio rerio	32100	ZFIN:ZDB-GENE-041008-78

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements