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TBP-associated factor 4

Summary

Gene Symbol

Taf4

Organism

Drosophila melanogaster (fruit fly)

External Links

NCBI Gene

39765

PubChem

39765

Alliance of Genome Resources

FB:FBgn0010280

Annotation

Keyword

Alternative splicing
Coiled coil
Direct protein sequencing
Nucleus
Proteomics identification
Reference proteome
Transcription regulation

Proteins

Displaying **all 6** entries
UniProt	Protein Name
M9PFP3
P47825	110 kDa TBP-associated factor Transcription initiation factor TFIID 110 kDa subunit
M9PI76
E1JI11
B7Z060
A4V201

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 8 in total

1

2

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GO Term	Evidence Code	PMID
transcription, DNA-templated	IEA
DNA-templated transcription	IEA
DNA-templated transcription initiation	IEA
transcription by RNA polymerase II	IPI	8327460
transcription initiation at RNA polymerase II promoter	ISS	10908585

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

biosynthetic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

organic cyclic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

organic substance metabolic process [inference]

macromolecule metabolic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

organic cyclic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

organic cyclic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

organic cyclic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular process [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

aromatic compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

cellular nitrogen compound biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

nucleic acid metabolic process [inference]

RNA metabolic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

heterocycle biosynthetic process [inference]

nucleobase-containing compound biosynthetic process [inference]

RNA biosynthetic process [inference]

transcription, DNA-templated

transcription by RNA polymerase II

DNA-templated transcription initiation

transcription initiation at RNA polymerase II promoter

Displaying **all 5** entries
GO Term	Evidence Code	PMID
nucleus	IDA	16895980 7664336
transcription factor TFIID complex	ISS	10908585
transcription factor TFIID complex	IBA
transcription factor TFIID complex	IPI	16895980 8327460
transcription factor TFIID complex	IEA

GO Hierarchy

cellular component

protein-containing complex [inference]

transcription regulator complex [inference]

RNA polymerase II transcription regulator complex [inference]

transcription factor TFIID complex

nuclear protein-containing complex [inference]

RNA polymerase II transcription regulator complex [inference]

transcription factor TFIID complex

cellular anatomical entity [inference]

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

Displaying entries **1 - 5** of 7 in total

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GO Term	Evidence Code	PMID
TFIIA-class transcription factor complex binding	IPI	8224849
DNA binding	IDA	15601843
DNA binding	IBA
RNA polymerase II general transcription initiation factor activity	IDA	16895980 7664336
RNA polymerase II general transcription initiation factor activity	IBA

GO Hierarchy

molecular function

binding [inference]

protein binding [inference]

basal transcription machinery binding [inference]

basal RNA polymerase II transcription machinery binding [inference]

RNA polymerase II general transcription initiation factor binding [inference]

TFIIA-class transcription factor complex binding

transcription factor binding [inference]

general transcription initiation factor binding [inference]

RNA polymerase II general transcription initiation factor binding [inference]

TFIIA-class transcription factor complex binding

DNA-binding transcription factor binding

protein dimerization activity [inference]

protein heterodimerization activity

protein-containing complex binding [inference]

TFIIA-class transcription factor complex binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

DNA binding

general transcription initiation factor activity [inference]

RNA polymerase II general transcription initiation factor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

transcription initiation factor TFIID subunit

Functional Category

E: Amino acid transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 2** entries
Gene Ontology
protein heterodimerization activity
transcription initiation at RNA polymerase II promoter

Displaying **all 5** entries
InterPro
Histone-fold
TAFH/NHR1 domain superfamily
TAFH/NHR1
Transcription initiation factor TFIID component TAF4, C-terminal
Transcription initiation factor TFIID component TAF4

Alliance of Genome Resources

Expression

Displaying **all 2** entries
Location	References
condensed chromosome	PMID:17923096
nucleus	PMID:16895980 PMID:7664336

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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External Links

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OrthoDB (Group)

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Acknowledgements