Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
polycystin 1, transient receptor potential channel interacting

Summary
Gene Symbol
  • PKD1
Aliases
  • PBP
  • Pc-1
  • TRPP1
  • polycystin 1
  • transient receptor potential cation channel, subfamily P, member 1
Organism
Homo sapiens (human)
NCBI Gene
5310
HGNC
9008
KEGG Gene ID
hsa:5310
PubChem
5310
Alliance of Genome Resources
Annotation
Keyword
  • 3D-structure
  • Alternative splicing
  • Autocatalytic cleavage
  • Cell membrane
  • Ciliopathy
  • Cilium
  • Coiled coil
  • Disease variant
  • Disulfide bond
  • Endoplasmic reticulum
  • Glycoprotein
  • Golgi apparatus
  • Lectin
  • Leucine-rich repeat
  • Phosphoprotein
  • Reference proteome
  • Repeat
  • Secreted
  • Signal
  • Transmembrane helix
  • Wnt signaling pathway
Proteins
Displaying 1 entry
UniProt Protein Name
P98161
  • Autosomal dominant polycystic kidney disease 1 protein
Annotation information from UniProt.
Gene Ontology (GO)
Displaying entry 46 - 46 of 46 in total
GO Term Evidence Code PMID
metanephric ascending thin limb development
GO Hierarchy
Displaying entries 11 - 15 of 19 in total
GO Term Evidence Code PMID
endoplasmic reticulum
ciliary membrane
basolateral plasma membrane
polycystin complex
nucleus
GO Hierarchy
Displaying entries 1 - 5 of 9 in total
GO Term Evidence Code PMID
protein binding
transcription regulator inhibitor activity
calcium channel activity
protein kinase binding
transmembrane transporter binding
GO Hierarchy
Gene Ontology information from NCBI Gene and UniProt.
OrthoDB (Group)
Group level
Eukaryota
Group Name
polycystin-1
Functional Category
  • G: Carbohydrate transport and metabolism
  • O: Posttranslational modification, protein turnover, chaperones
  • Q: Secondary metabolites biosynthesis, transport and catabolism
Displaying all 2 entries
Gene Ontology
calcium ion transport
kidney development
Displaying entries 1 - 10 of 15 in total
InterPro
C-type lectin fold
C-type lectin-like/link domain superfamily
C-type lectin-like
GPS motif
Immunoglobulin-like fold
PKD domain superfamily
PKD domain
PKD/Chitinase domain
PKD/REJ-like domain
PLAT/LH2 domain superfamily
Human Protein Atlas
ENSG00000008710

soft tissue soft tissue blood blood blood blood blood blood blood blood blood blood blood blood blood blood lymph node lymph node lymph node lymph node lymph node lymph node lymph node lymph node lymph node lymph node lymph node kidney kidney adrenal gland adrenal gland breast breast duodenum stomach small intestine colon rectum appendix esophagus eye eye salivary gland nasopharynx nasopharynx tongue tonsil tonsil tonsil hair skin adipose tissue adipose tissue adipose tissue spinal cord oral mucosa lung lung heart bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus liver pancreas thyroid gland parathyroid gland parathyroid gland parathyroid gland parathyroid gland parathyroid gland spleen gallbladder ductus deferens ductus deferens seminal vesicle seminal vesicle seminal vesicle seminal vesicle testis testis epididymis epididymis brain smooth muscle urinary bladder prostate bone marrow skeletal muscle skeletal muscle skeletal muscle skeletal muscle skeletal muscle thymus thymus cartilage sole of foot sole of foot soft tissue blood blood blood blood blood blood blood blood blood blood blood blood lymph node lymph node lymph node lymph node lymph node lymph node lymph node lymph node lymph node lymph node lymph node lactating breast lactating breast kidney kidney adrenal gland adrenal gland duodenum stomach small intestine colon rectum appendix esophagus eye eye salivary gland salivary gland salivary gland salivary gland salivary gland salivary gland nasopharynx tongue tonsil tonsil hair skin adipose tissue adipose tissue adipose tissue adipose tissue adipose tissue adipose tissue adipose tissue spinal cord oral mucosa lung lung heart bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus bronchus liver pancreas thyroid gland parathyroid gland parathyroid gland parathyroid gland parathyroid gland parathyroid gland spleen gallbladder brain skeletal muscle skeletal muscle skeletal muscle skeletal muscle skeletal muscle thymus thymus smooth muscle urinary bladder vagina ovary ovary fallopian tube fallopian tube endometrium placenta cervix cervix bone marrow cartilage sole of foot sole of foot olfactory region cerebral cortex cerebellum medulla pons midbrain pituitary gland hypothalamus amygdala thalamus choroid plexus choroid plexus corpus callosum basal ganglia substantia nigra dorsal raphe dorsal raphe dorsal raphe dorsal raphe dorsal raphe dorsal raphe caudate hippocampus retina retina

Tissue with high expression from Human Protein Atlas. Tissues that are highly expressed are highlighted.

Data available from v23.0.proteinatlas.org. Image credit: Human Protein Atlas
KEGG BRITE Database
Orthology
K04985
Name
polycystin 1
References
Disease
Disease Ontology
Displaying all 7 entries
DO ID Disease Name Source
DOID:0050770 polycystic liver disease
DOID:0080322 polycystic kidney disease
DOID:0110858 polycystic kidney disease 1
DOID:0110861 autosomal recessive polycystic kidney disease
DOID:10941 intracranial aneurysm
DOID:11984 hypertrophic cardiomyopathy
DOID:898 autosomal dominant polycystic kidney disease
The Human Phenotype Ontology
Displaying entries 11 - 20 of 30 in total
HPO ID HPO Term
HP:0001634 Mitral valve prolapse
HP:0001653 Mitral regurgitation
HP:0001737 Pancreatic cysts
HP:0002253 Colonic diverticula
HP:0002616 Aortic root aneurysm
HP:0003259 Elevated circulating creatinine concentration
HP:0003774 Stage 5 chronic kidney disease
HP:0004944 Dilatation of the cerebral artery
HP:0006557 Polycystic liver disease
HP:0007029 Cerebral berry aneurysm
Displaying all 2 entries
Disease ID Disease Name
OMIM:173900
  • polycystic kidney disease 1
ORPHA:730
  • autosomal dominant polycystic kidney disease
PubChem Disease
GHR Health Conditions
MedGen Diseases
OMIM Phenotypes
KEGG Diseases
Gene-Disease-Co-Occurrences-in-Literature (PubChem)
Ortholog
Displaying entries 1 - 10 of 70 in total
Species Gene ID OrthoDB Alliance of Genome Resources Orthologous MAtrix
18763 MGI:97603 MOUSE20261
24650 RGD:3333 RATNO01191
453954 9598_0:004073
565697 ZFIN:ZDB-GENE-100707-2
606755 CANLF16686
694905 MACMU27550
733339 Xenbase:XB-GENE-483413
100012596 MONDO28798
100089024 ORNAN14089
100144606 FELCA35710
About Release Notes Help Feedback
International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024