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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
PDZ and LIM domain 5
Summary
- Gene Symbol
-
- Pdlim5
- Organism
- Mus musculus (house mouse)
Annotation
- Keyword
-
- 3D-structure
- Acetylation
- Alternative splicing
- Cell projection
- Cytoplasm
- Isopeptide bond
- LIM domain
- Phosphoprotein
- Proteomics identification
- Reference proteome
- Repeat
- Synapse
- Ubl conjugation
- Proteins
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| regulation of dendritic spine morphogenesis |
| GO Term | Evidence Code | PMID |
|---|---|---|
| adherens junction | ||
| actin cytoskeleton | ||
| cytosol | ||
| Z disc | ||
| stress fiber |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| actin binding | ||
| actinin binding | ||
| metal ion binding | ||
| muscle alpha-actinin binding |
GO Hierarchy
OrthoDB (Group)
- Group level
- Rodentia
- Group Name
- PDZ and LIM domain protein 5
- Functional Category
-
- E: Amino acid transport and metabolism
- O: Posttranslational modification, protein turnover, chaperones
- P: Inorganic ion transport and metabolism
| Gene Ontology |
|---|
| actin binding |
| actin cytoskeleton organization |
| metal ion binding |
| muscle alpha-actinin binding |
| muscle structure development |
| InterPro |
|---|
| PDZ domain |
| PDZ superfamily |
| Zinc finger, LIM-type |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0050700 | cardiomyopathy | |
| DOID:0080095 | myofibrillar myopathy 4 | |
| DOID:12930 | dilated cardiomyopathy | |
| DOID:423 | myopathy |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 109073044 | CYPCA15161 | |||
| 109082025 | CYPCA18380 | |||
| 109322127 | CROPO11753 | |||
| 109687403 | 51338_0:001bb9 | |||
| 110223038 | PHACI19281 | |||
| 110290830 | 10089_0:000e7f | |||
| 110321017 | 10093_0:0013b7 | |||
| 110562794 | 10047_0:003d01 | |||
| 112932631 | VULVU28396 | |||
| 113195807 | 9999_0:00342d |
