GlyCosmos Portal

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GO Term	Evidence Code	PMID
RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
DNA-binding transcription factor activity, RNA polymerase II-specific	IBA
DNA-binding transcription repressor activity, RNA polymerase II-specific	IDA	17469184
protein binding	IPI	10049357 12419246 12435627 12646588 14525983 15231748 18729074 19008232 19032343 19049980 22334647 22442258 23610558 25609649 26977879 33961781 34819669 8514802 9569025
zinc ion binding	IDA	12419246

GO Hierarchy

molecular function

binding [inference]

protein binding

transcription factor binding [inference]

DNA-binding transcription factor binding

enzyme binding [inference]

kinase binding [inference]

protein kinase binding

ubiquitin-like protein ligase binding [inference]

ubiquitin protein ligase binding

ion binding [inference]

cation binding [inference]

metal ion binding [inference]

transition metal ion binding [inference]

zinc ion binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

transcription regulatory region nucleic acid binding [inference]

transcription cis-regulatory region binding [inference]

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

DNA binding [inference]

double-stranded DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding [inference]

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

sequence-specific DNA binding [inference]

sequence-specific double-stranded DNA binding [inference]

transcription cis-regulatory region binding [inference]

RNA polymerase II transcription regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

cis-regulatory region sequence-specific DNA binding [inference]

RNA polymerase II cis-regulatory region sequence-specific DNA binding

molecular function regulator activity [inference]

enzyme regulator activity [inference]

enzyme inhibitor activity [inference]

histone deacetylase inhibitor activity

histone deacetylase regulator activity [inference]

histone deacetylase inhibitor activity

molecular function inhibitor activity [inference]

enzyme inhibitor activity [inference]

histone deacetylase inhibitor activity

transcription regulator activity [inference]

DNA-binding transcription factor activity [inference]

DNA-binding transcription factor activity, RNA polymerase II-specific

DNA-binding transcription repressor activity, RNA polymerase II-specific

DNA-binding transcription repressor activity [inference]

DNA-binding transcription repressor activity, RNA polymerase II-specific

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

SKI

Functional Category

E: Amino acid transport and metabolism
G: Carbohydrate transport and metabolism
T: Signal transduction mechanisms

Displaying 1 entry
Gene Ontology
SMAD binding

Displaying **all 6** entries
InterPro
Putative DNA-binding domain superfamily
SAND-like domain superfamily
SKI/SNO/DAC domain
Ski-like, DNA-binding domain superfamily
Transcription regulator SKI/SnoN
c-SKI SMAD4-binding domain

Ortholog

Displaying entries **1 - 10** of 65 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Xenopus tropicalis	6497	Xenbase:XB-GENE-494028
Drosophila melanogaster	6498	FB:FBgn0085450
Mus musculus	20481		MOUSE40878
Drosophila melanogaster	20482	FB:FBgn0085450
Danio rerio	30101		DANRE42769
Rattus norvegicus	313757		RATNO33049
Pan troglodytes	457216		PANTR19716
Canis lupus familiaris	489610		CANLF15755
Macaca mulatta	697890		MACMU23568
Equus caballus	100033833		HORSE28970

GlyTouCan

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UniCarb-DR

LM-GlycoRepo

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OrthoDB (Group)

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Acknowledgements