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NDC1 transmembrane nucleoporin

Summary

Gene Symbol

Ndc1

Organism

Mus musculus (house mouse)

External Links

NCBI Gene

72787

PubChem

72787

Alliance of Genome Resources

MGI:1920037

Annotation

Keyword

Nuclear pore complex
Phosphoprotein
Reference proteome
Transmembrane helix

Proteins

Displaying 1 entry
UniProt	Protein Name
Q8VCB1	Transmembrane protein 48

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 10 in total

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GO Term	Evidence Code	PMID
nucleocytoplasmic transport	NAS	12791264
nuclear pore organization	IBA
homologous chromosome pairing at meiosis	IMP	24045954
spermatogenesis	IMP	24045954
protein transport	IEA

GO Hierarchy

biological process

cellular process [inference]

cell cycle process [inference]

meiotic cell cycle process [inference]

chromosome organization involved in meiotic cell cycle [inference]

homologous chromosome pairing at meiosis

cellular localization [inference]

intracellular transport [inference]

nuclear transport [inference]

nucleocytoplasmic transport

localization within membrane [inference]

nuclear pore localization

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport

cellular component organization or biogenesis [inference]

cellular component organization [inference]

organelle organization [inference]

nucleus organization [inference]

nuclear pore organization

nuclear pore complex assembly

nuclear pore localization

chromosome organization [inference]

chromosome organization involved in meiotic cell cycle [inference]

homologous chromosome pairing at meiosis

cellular component assembly [inference]

protein-containing complex assembly [inference]

pore complex assembly [inference]

nuclear pore complex assembly

protein-containing complex organization [inference]

nuclear pore organization

nuclear pore complex assembly

protein-containing complex assembly [inference]

pore complex assembly [inference]

nuclear pore complex assembly

reproductive process [inference]

developmental process involved in reproduction [inference]

spermatogenesis

multicellular organismal reproductive process [inference]

gamete generation [inference]

male gamete generation [inference]

spermatogenesis

meiotic cell cycle process [inference]

chromosome organization involved in meiotic cell cycle [inference]

homologous chromosome pairing at meiosis

developmental process [inference]

developmental process involved in reproduction [inference]

spermatogenesis

localization [inference]

protein-containing complex localization [inference]

nuclear pore localization

macromolecule localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport

establishment of localization [inference]

transport [inference]

intracellular transport [inference]

nuclear transport [inference]

nucleocytoplasmic transport

organic substance transport [inference]

protein transport

nucleobase-containing compound transport [inference]

nucleic acid transport [inference]

RNA transport [inference]

mRNA transport

nitrogen compound transport [inference]

protein transport

nucleobase-containing compound transport [inference]

nucleic acid transport [inference]

RNA transport [inference]

mRNA transport

establishment of protein localization [inference]

protein transport

establishment of RNA localization [inference]

RNA transport [inference]

mRNA transport

establishment of localization in cell [inference]

intracellular transport [inference]

nuclear transport [inference]

nucleocytoplasmic transport

cellular localization [inference]

intracellular transport [inference]

nuclear transport [inference]

nucleocytoplasmic transport

localization within membrane [inference]

nuclear pore localization

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization [inference]

protein transport

Displaying entries **1 - 5** of 12 in total

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GO Term	Evidence Code	PMID
nuclear envelope	ISO
nuclear pore	ISO
nuclear pore	NAS	12791264
nuclear pore	IDA	24045954
cytoplasm	IDA	24045954

GO Hierarchy

cellular component

protein-containing complex [inference]

nuclear protein-containing complex [inference]

cellular anatomical entity [inference]

cytoplasm

membrane [inference]

plasma membrane

organelle membrane [inference]

nuclear membrane

envelope [inference]

organelle envelope [inference]

nuclear envelope

organelle [inference]

non-membrane-bounded organelle [inference]

intracellular non-membrane-bounded organelle [inference]

cytoskeleton [inference]

actin cytoskeleton

intracellular organelle [inference]

intracellular non-membrane-bounded organelle [inference]

cytoskeleton [inference]

actin cytoskeleton

Displaying **all 3** entries
GO Term	Evidence Code	PMID
structural constituent of nuclear pore	ISO
structural constituent of nuclear pore	IEA
protein-macromolecule adaptor activity	IBA

GO Hierarchy

molecular function

structural molecule activity [inference]

structural constituent of nuclear pore

molecular adaptor activity [inference]

protein-macromolecule adaptor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

NDC1

Functional Category

I: Lipid transport and metabolism
Q: Secondary metabolites biosynthesis, transport and catabolism
T: Signal transduction mechanisms

Displaying **all 3** entries
Gene Ontology
mRNA transport
nuclear pore organization
spindle pole body-nuclear membrane anchor activity

Displaying 1 entry
InterPro
Nucleoporin protein Ndc1-Nup

Ortholog

Displaying entries **11 - 20** of 60 in total

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Species	Gene ID	Orthologous MAtrix
Oryctolagus cuniculus	100354365	RABIT03892
Meleagris gallopavo	100542750	MELGA02445
Nomascus leucogenys	100594861	NOMLE30439
Sus scrofa	100621612	PIGXX30345
Loxodonta africana	100676039	LOXAF13579
Canis lupus familiaris	100684187	CANLF15691
Oreochromis niloticus	100701468	ORENI28969
Cavia porcellus	100716231	CAVPO21143
Pan paniscus	100982074	PANPA01427
Papio anubis	101020132	PAPAN21304