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Guidelines

MIRAGE

2-dehydro-3-deoxygluconokinase

Summary

Gene Symbol

kdgK

Organism

Shigella boydii

External Links

NCBI Gene: 75201974
PubChem: 75201974

Annotation

Keyword

ATP-binding
Carbohydrate metabolism
Kinase
Reference proteome

Proteins

Displaying **all 10** entries
UniProt	Protein Name
A0A836ZBD0	2-keto-3-deoxygluconokinase 3-deoxy-2-oxo-D-gluconate kinase KDG kinase
A0AA35F726	2-keto-3-deoxygluconokinase 3-deoxy-2-oxo-D-gluconate kinase KDG kinase
A7ZT67	2-keto-3-deoxygluconokinase 3-deoxy-2-oxo-D-gluconate kinase KDG kinase
A0A066RDL0	2-keto-3-deoxygluconokinase 3-deoxy-2-oxo-D-gluconate kinase KDG kinase
A0A7U9NYK2	2-keto-3-deoxygluconokinase 3-deoxy-2-oxo-D-gluconate kinase KDG kinase
A0A7Z8FJS3	2-keto-3-deoxygluconokinase 3-deoxy-2-oxo-D-gluconate kinase KDG kinase
A0A9Q5UBR1	2-keto-3-deoxygluconokinase 3-deoxy-2-oxo-D-gluconate kinase KDG kinase
A0AAN3V879	2-keto-3-deoxygluconokinase 3-deoxy-2-oxo-D-gluconate kinase KDG kinase
E0J5J4	2-keto-3-deoxygluconokinase 3-deoxy-2-oxo-D-gluconate kinase KDG kinase
A0A7Z8GGS7	2-keto-3-deoxygluconokinase 3-deoxy-2-oxo-D-gluconate kinase KDG kinase

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 3** entries
GO Term	Evidence Code	PMID
phosphorylation
D-galacturonate catabolic process
D-glucuronate catabolic process

GO Hierarchy

biological process

metabolic process [inference]

catabolic process [inference]

cellular catabolic process [inference]

organic acid catabolic process [inference]

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

small molecule catabolic process [inference]

organic acid catabolic process [inference]

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

monosaccharide catabolic process [inference]

D-galacturonate catabolic process

organic substance catabolic process [inference]

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

D-galacturonate catabolic process

organic acid catabolic process [inference]

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

cellular metabolic process [inference]

organic acid metabolic process [inference]

organic acid catabolic process [inference]

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

monocarboxylic acid metabolic process [inference]

uronic acid metabolic process [inference]

glucuronate metabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

D-glucuronate metabolic process [inference]

D-glucuronate catabolic process

galacturonate metabolic process [inference]

D-galacturonate metabolic process [inference]

D-galacturonate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

phosphorus metabolic process [inference]

phosphate-containing compound metabolic process [inference]

phosphorylation

cellular catabolic process [inference]

organic acid catabolic process [inference]

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

primary metabolic process [inference]

carbohydrate metabolic process [inference]

monosaccharide metabolic process [inference]

monosaccharide catabolic process [inference]

D-galacturonate catabolic process

D-galacturonate metabolic process [inference]

D-galacturonate catabolic process

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

D-galacturonate catabolic process

small molecule metabolic process [inference]

monosaccharide metabolic process [inference]

monosaccharide catabolic process [inference]

D-galacturonate catabolic process

D-galacturonate metabolic process [inference]

D-galacturonate catabolic process

organic acid metabolic process [inference]

organic acid catabolic process [inference]

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

monocarboxylic acid metabolic process [inference]

uronic acid metabolic process [inference]

glucuronate metabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

D-glucuronate metabolic process [inference]

D-glucuronate catabolic process

galacturonate metabolic process [inference]

D-galacturonate metabolic process [inference]

D-galacturonate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

small molecule catabolic process [inference]

organic acid catabolic process [inference]

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

monosaccharide catabolic process [inference]

D-galacturonate catabolic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

monosaccharide metabolic process [inference]

monosaccharide catabolic process [inference]

D-galacturonate catabolic process

D-galacturonate metabolic process [inference]

D-galacturonate catabolic process

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

D-galacturonate catabolic process

organic acid metabolic process [inference]

organic acid catabolic process [inference]

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

monocarboxylic acid metabolic process [inference]

uronic acid metabolic process [inference]

glucuronate metabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

D-glucuronate metabolic process [inference]

D-glucuronate catabolic process

galacturonate metabolic process [inference]

D-galacturonate metabolic process [inference]

D-galacturonate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

organic substance catabolic process [inference]

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

D-galacturonate catabolic process

organic acid catabolic process [inference]

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

cellular process [inference]

cellular metabolic process [inference]

organic acid metabolic process [inference]

organic acid catabolic process [inference]

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

monocarboxylic acid metabolic process [inference]

uronic acid metabolic process [inference]

glucuronate metabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

D-glucuronate metabolic process [inference]

D-glucuronate catabolic process

galacturonate metabolic process [inference]

D-galacturonate metabolic process [inference]

D-galacturonate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

phosphorus metabolic process [inference]

phosphate-containing compound metabolic process [inference]

phosphorylation

cellular catabolic process [inference]

organic acid catabolic process [inference]

carboxylic acid catabolic process [inference]

monocarboxylic acid catabolic process [inference]

glucuronate catabolic process [inference]

D-glucuronate catabolic process

galacturonate catabolic process [inference]

D-galacturonate catabolic process

cellular response to stimulus [inference]

cellular response to stress [inference]

DNA damage response

response to stimulus [inference]

response to stress [inference]

cellular response to stress [inference]

DNA damage response

cellular response to stimulus [inference]

cellular response to stress [inference]

DNA damage response

Displaying 1 entry
GO Term	Evidence Code	PMID
cytosol

GO Hierarchy

cellular component

cellular anatomical entity [inference]

cytosol

Displaying **all 3** entries
GO Term	Evidence Code	PMID
nucleotide binding
ATP binding
2-dehydro-3-deoxygluconokinase activity

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

transferase activity, transferring phosphorus-containing groups [inference]

kinase activity [inference]

carbohydrate kinase activity [inference]

2-dehydro-3-deoxygluconokinase activity

phosphotransferase activity, alcohol group as acceptor [inference]

2-dehydro-3-deoxygluconokinase activity

binding [inference]

small molecule binding [inference]

heterocyclic compound binding [inference]

nucleotide binding

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ion binding [inference]

anion binding [inference]

purine ribonucleoside triphosphate binding [inference]

ATP binding

organic cyclic compound binding [inference]

nucleoside phosphate binding [inference]

nucleotide binding

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleoside triphosphate binding [inference]

ATP binding

carbohydrate derivative binding [inference]

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

Gene Ontology information from NCBI Gene and UniProt.

Rhea

ATP + 2-dehydro-3-deoxy-D-gluconate

H⁺ + ADP + 2-dehydro-3-deoxy-6-phospho-D-gluconate

Enzyme

PMID

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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GlyCosmos Portal v4.4.0

Last updated: December 8, 2025