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PDZ domain containing 7

Summary

Gene Symbol

PDZD7

Organism

Homo sapiens (human)

External Links

NCBI Gene

79955

PubChem

79955

Alliance of Genome Resources

HGNC:26257

Annotation

Keyword

3D-structure
Alternative splicing
Cell projection
Chromosomal rearrangement
Cilium
Disease variant
Non-syndromic deafness
Nucleus
Proteomics identification
Reference proteome
Repeat
Retinitis pigmentosa
Usher syndrome

Proteins

Displaying **all 3** entries
UniProt	Protein Name
A0A2R8Y892
Q9H5P4
A0A2R8YFN1

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 8 in total

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GO Term	Evidence Code	PMID
sensory perception of sound	IBA
establishment of protein localization	ISS
detection of mechanical stimulus involved in sensory perception of sound	ISS
establishment of localization in cell	IEA
auditory receptor cell stereocilium organization	ISS

GO Hierarchy

biological process

cellular process [inference]

cellular developmental process [inference]

cell differentiation [inference]

neuron differentiation [inference]

mechanoreceptor differentiation [inference]

inner ear receptor cell differentiation

cell development [inference]

neuron development [inference]

inner ear receptor cell development [inference]

auditory receptor cell development

cellular localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization

cellular component organization or biogenesis [inference]

cellular component organization [inference]

cell projection organization [inference]

plasma membrane bounded cell projection organization [inference]

neuron projection development [inference]

inner ear receptor cell stereocilium organization [inference]

auditory receptor cell stereocilium organization

multicellular organismal process [inference]

system process [inference]

nervous system process [inference]

sensory perception [inference]

sensory perception of mechanical stimulus [inference]

sensory perception of sound

detection of mechanical stimulus involved in sensory perception of sound

developmental process [inference]

anatomical structure development [inference]

cell development [inference]

neuron development [inference]

inner ear receptor cell development [inference]

auditory receptor cell development

cellular developmental process [inference]

cell differentiation [inference]

neuron differentiation [inference]

mechanoreceptor differentiation [inference]

inner ear receptor cell differentiation

cell development [inference]

neuron development [inference]

inner ear receptor cell development [inference]

auditory receptor cell development

response to stimulus [inference]

response to external stimulus [inference]

detection of external stimulus [inference]

detection of mechanical stimulus [inference]

detection of mechanical stimulus involved in sensory perception [inference]

detection of mechanical stimulus involved in sensory perception of sound

response to mechanical stimulus [inference]

detection of mechanical stimulus [inference]

detection of mechanical stimulus involved in sensory perception [inference]

detection of mechanical stimulus involved in sensory perception of sound

response to abiotic stimulus [inference]

detection of abiotic stimulus [inference]

detection of mechanical stimulus [inference]

detection of mechanical stimulus involved in sensory perception [inference]

detection of mechanical stimulus involved in sensory perception of sound

response to mechanical stimulus [inference]

detection of mechanical stimulus [inference]

detection of mechanical stimulus involved in sensory perception [inference]

detection of mechanical stimulus involved in sensory perception of sound

detection of stimulus [inference]

detection of external stimulus [inference]

detection of mechanical stimulus [inference]

detection of mechanical stimulus involved in sensory perception [inference]

detection of mechanical stimulus involved in sensory perception of sound

detection of abiotic stimulus [inference]

detection of mechanical stimulus [inference]

detection of mechanical stimulus involved in sensory perception [inference]

detection of mechanical stimulus involved in sensory perception of sound

detection of stimulus involved in sensory perception [inference]

detection of mechanical stimulus involved in sensory perception [inference]

detection of mechanical stimulus involved in sensory perception of sound

localization [inference]

macromolecule localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization

establishment of localization [inference]

cellular localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

establishment of protein localization

Displaying entries **1 - 5** of 13 in total

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GO Term	Evidence Code	PMID
stereocilia ankle link	ISS
stereocilia ankle link complex	ISS
stereocilia ankle link complex	IBA
extracellular space	HDA	22664934
nucleus	IDA	20440071

GO Hierarchy

cellular component

protein-containing complex [inference]

cellular anatomical entity [inference]

stereocilia coupling link [inference]

stereocilia ankle link

microtubule organizing center [inference]

ciliary basal body

membrane [inference]

plasma membrane

stereocilium tip

cell projection [inference]

plasma membrane bounded cell projection [inference]

cilium

neuron projection [inference]

stereocilium

actin-based cell projection [inference]

stereocilium

organelle [inference]

membrane-bounded organelle [inference]

cilium

intracellular membrane-bounded organelle [inference]

nucleus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

Displaying **all 2** entries
GO Term	Evidence Code	PMID
protein binding	IPI	19028668 20440071
identical protein binding	IEA

GO Hierarchy

molecular function

binding [inference]

protein binding

identical protein binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

PDZ domain-containing protein 7

Functional Category

E: Amino acid transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 2** entries
Gene Ontology
auditory receptor cell stereocilium organization
sensory perception of sound

Displaying **all 2** entries
InterPro
PDZ domain
PDZ superfamily

Disease

Disease Ontology

Displaying **all 3** entries
DO ID	Disease Name	Source
DOID:0110838	Usher syndrome type 2A	Alliance of Genome Resources
DOID:0110839	Usher syndrome type 2C	Alliance of Genome Resources
DOID:0111635	autosomal recessive nonsyndromic deafness 57	Alliance of Genome Resources

Ortholog

Displaying entries **1 - 10** of 58 in total

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Xenopus tropicalis	79955	Xenbase:XB-GENE-6049796
Rattus norvegicus	293996		RATNO16250
Pan troglodytes	450682		PANTR01380
Equus caballus	100070266		HORSE17125
Pongo abelii	100172408		PONAB02057
Danio rerio	100332580		DANRE05946
Callithrix jacchus	100412186		CALJA07222
Mus musculus	100503041		MOUSE26125
Nomascus leucogenys	100606712		NOMLE27545
Oreochromis niloticus	100692370		ORENI70743

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

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Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements