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xyloglucan endotransglucosylase/hydrolase 4

Summary

Gene Symbol

XTH4

Organism

Arabidopsis thaliana (thale cress)

External Links

NCBI Gene: 815247
KEGG Gene ID: ath:AT2G06850
PubChem: 815247

Annotation

Keyword

Apoplast
Cell wall
Cell wall biogenesis/degradation
Disulfide bond
Glycoprotein
Glycosidase
Proteomics identification
Reference proteome
Signal
Transferase

Proteins

Displaying **all 3** entries
UniProt	Protein Name
A0A178VUP5
A0A1P8B288
Q39099

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 9 in total

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GO Term	Evidence Code	PMID
cell wall biogenesis	IEA
plant-type secondary cell wall biogenesis	IGI	32005783
unidimensional cell growth	IMP	10557219
response to mechanical stimulus	IEP	8696366
response to auxin	IEP	8696366

GO Hierarchy

biological process

metabolic process [inference]

primary metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

cell wall polysaccharide metabolic process [inference]

hemicellulose metabolic process [inference]

xyloglucan metabolic process

glucan metabolic process [inference]

xyloglucan metabolic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

cell wall polysaccharide metabolic process [inference]

hemicellulose metabolic process [inference]

xyloglucan metabolic process

glucan metabolic process [inference]

xyloglucan metabolic process

macromolecule metabolic process [inference]

polysaccharide metabolic process [inference]

cell wall polysaccharide metabolic process [inference]

hemicellulose metabolic process [inference]

xyloglucan metabolic process

glucan metabolic process [inference]

xyloglucan metabolic process

cell wall macromolecule metabolic process [inference]

cell wall polysaccharide metabolic process [inference]

hemicellulose metabolic process [inference]

xyloglucan metabolic process

cellular process [inference]

cell growth [inference]

unidimensional cell growth

cell wall organization or biogenesis [inference]

cell wall biogenesis

plant-type cell wall biogenesis [inference]

plant-type secondary cell wall biogenesis

cell wall organization

plant-type cell wall organization or biogenesis [inference]

plant-type cell wall biogenesis [inference]

plant-type secondary cell wall biogenesis

cellular component organization or biogenesis [inference]

cellular component organization [inference]

external encapsulating structure organization [inference]

cell wall organization

cellular component biogenesis [inference]

cell wall biogenesis

plant-type cell wall biogenesis [inference]

plant-type secondary cell wall biogenesis

developmental process [inference]

anatomical structure morphogenesis [inference]

cell morphogenesis [inference]

unidimensional cell growth

anatomical structure development [inference]

tissue development [inference]

phloem or xylem histogenesis [inference]

xylem development

growth [inference]

cell growth [inference]

unidimensional cell growth

developmental growth [inference]

developmental growth involved in morphogenesis [inference]

unidimensional cell growth

response to stimulus [inference]

response to external stimulus [inference]

response to mechanical stimulus

response to abiotic stimulus [inference]

response to radiation [inference]

response to light stimulus [inference]

response to light intensity [inference]

response to low light intensity stimulus

response to mechanical stimulus

response to endogenous stimulus [inference]

response to hormone [inference]

response to auxin

response to chemical [inference]

response to organic substance [inference]

response to hormone [inference]

response to auxin

Displaying entries **1 - 5** of 6 in total

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GO Term	Evidence Code	PMID
plant-type cell wall	HDA	15593128 15610358 16287169
extracellular region	IDA ISM	1400418
apoplast
mitochondrion	HDA	28887381
plasmodesma	HDA	21533090

GO Hierarchy

cellular component

cellular anatomical entity [inference]

extracellular region

apoplast

cytoplasm

cell junction [inference]

anchoring junction [inference]

cell-cell junction [inference]

plasmodesma

external encapsulating structure [inference]

cell wall [inference]

plant-type cell wall

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

mitochondrion

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

mitochondrion

Displaying **all 3** entries
GO Term	Evidence Code	PMID
hydrolase activity, hydrolyzing O-glycosyl compounds	IEA
polysaccharide binding	ISS
xyloglucan:xyloglucosyl transferase activity	IEA IMP ISS	1400418 32005783 8696366

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

glycosyltransferase activity [inference]

hexosyltransferase activity [inference]

glucosyltransferase activity [inference]

xyloglucan:xyloglucosyl transferase activity

hydrolase activity [inference]

hydrolase activity, acting on glycosyl bonds [inference]

hydrolase activity, hydrolyzing O-glycosyl compounds

binding [inference]

carbohydrate binding [inference]

polysaccharide binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Xyloglucan endotransglucosylase/hydrolase

Functional Category

G: Carbohydrate transport and metabolism
I: Lipid transport and metabolism
T: Signal transduction mechanisms

Displaying **all 2** entries
Gene Ontology
hydrolase activity, acting on glycosyl bonds
hydrolase activity

Displaying **all 2** entries
InterPro
Concanavalin A-like lectin/glucanase domain superfamily
Glycoside hydrolase family 16

KEGG BRITE Database

Orthology

K08235

Name

xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]

References

Ortholog

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Species	Gene ID	OrthoDB
Arabidopsis lyrata subsp. lyrata	9319808	81972_0:00296c
Capsella rubella	17893677	81985_0:002299
Eutrema salsugineum	18013666	72664_0:004401
Brassica rapa	103860348	3711_0:003d03
Camelina sativa	104699360	90675_0:000cdb
Camelina sativa	104747228	90675_0:00ecca
Camelina sativa	104766586	90675_0:011fd5
Tarenaya hassleriana	104808904	28532_0:001762
Tarenaya hassleriana	104826580	28532_0:0053d5
Brassica napus	106389424	3708_0:00d58c

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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Other Information

Tools

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Summary

External Links

Annotation

OrthoDB (Group)

KEGG BRITE Database

International Collaboration

Acknowledgements