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transcription regulatory protein SNF2

Summary

Gene Symbol

Organism

Arabidopsis thaliana (thale cress)

External Links

NCBI Gene: 819210
PubChem: 819210

Annotation

Keyword

Acetylation
Activator
Alternative splicing
Bromodomain
Chromatin regulator
Coiled coil
DNA-binding
Developmental protein
Helicase
Nucleus
Phosphoprotein
Reference proteome
Transcription regulation

Proteins

Displaying 1 entry
UniProt	Protein Name
Q6EVK6	Protein BRAHMA Protein CHROMATIN REMODELING 2

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **6 - 9** of 9 in total

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GO Term	Evidence Code	PMID
formation of plant organ boundary	IMP	9611175
vegetative phase change	IGI	27803189
organ boundary specification between lateral organs and the meristem	IGI	16854978
root meristem growth	IGI	29352064

GO Hierarchy

biological process

cellular process [inference]

cellular component organization or biogenesis [inference]

cellular component organization [inference]

protein-containing complex organization [inference]

protein-DNA complex organization [inference]

chromatin organization [inference]

chromatin remodeling [inference]

epigenetic regulation of gene expression

multicellular organismal process [inference]

post-embryonic development [inference]

vegetative phase change

developmental process [inference]

anatomical structure formation involved in morphogenesis [inference]

formation of anatomical boundary [inference]

formation of plant organ boundary

organ boundary specification between lateral organs and the meristem

growth [inference]

developmental growth [inference]

meristem growth [inference]

root meristem growth

biological regulation [inference]

regulation of biological process [inference]

regulation of metabolic process [inference]

regulation of biosynthetic process [inference]

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

regulation of gene silencing by regulatory ncRNA [inference]

regulation of regulatory ncRNA processing [inference]

regulation of miRNA processing

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

regulation of cellular metabolic process [inference]

regulation of nucleobase-containing compound metabolic process [inference]

regulation of RNA metabolic process [inference]

regulation of regulatory ncRNA processing [inference]

regulation of miRNA processing

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

regulation of gene silencing by regulatory ncRNA [inference]

regulation of regulatory ncRNA processing [inference]

regulation of miRNA processing

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

regulation of nitrogen compound metabolic process [inference]

regulation of nucleobase-containing compound metabolic process [inference]

regulation of RNA metabolic process [inference]

regulation of regulatory ncRNA processing [inference]

regulation of miRNA processing

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

regulation of macromolecule metabolic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

regulation of gene silencing by regulatory ncRNA [inference]

regulation of regulatory ncRNA processing [inference]

regulation of miRNA processing

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

regulation of RNA metabolic process [inference]

regulation of regulatory ncRNA processing [inference]

regulation of miRNA processing

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

regulation of primary metabolic process [inference]

regulation of nucleobase-containing compound metabolic process [inference]

regulation of RNA metabolic process [inference]

regulation of regulatory ncRNA processing [inference]

regulation of miRNA processing

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

positive regulation of biological process [inference]

positive regulation of cellular process [inference]

positive regulation of cellular response to heat

positive regulation of response to stimulus [inference]

positive regulation of cellular response to heat

regulation of response to stimulus [inference]

positive regulation of response to stimulus [inference]

positive regulation of cellular response to heat

regulation of response to stress [inference]

regulation of cellular response to stress [inference]

regulation of cellular response to heat [inference]

positive regulation of cellular response to heat

regulation of cellular process [inference]

regulation of cellular metabolic process [inference]

regulation of nucleobase-containing compound metabolic process [inference]

regulation of RNA metabolic process [inference]

regulation of regulatory ncRNA processing [inference]

regulation of miRNA processing

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

regulation of cellular biosynthetic process [inference]

regulation of macromolecule biosynthetic process [inference]

regulation of gene expression [inference]

regulation of gene silencing by regulatory ncRNA [inference]

regulation of regulatory ncRNA processing [inference]

regulation of miRNA processing

regulation of RNA biosynthetic process [inference]

regulation of transcription, DNA-templated

positive regulation of cellular process [inference]

positive regulation of cellular response to heat

regulation of cellular response to stress [inference]

regulation of cellular response to heat [inference]

positive regulation of cellular response to heat

Displaying 1 entry
GO Term	Evidence Code	PMID
nucleus	IDA ISM	15371304

GO Hierarchy

cellular component

cellular anatomical entity [inference]

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

Displaying entries **6 - 7** of 7 in total

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GO Term	Evidence Code	PMID
ATP hydrolysis activity
ATP binding

GO Hierarchy

molecular function

catalytic activity [inference]

hydrolase activity [inference]

hydrolase activity, acting on acid anhydrides [inference]

hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [inference]

pyrophosphatase activity [inference]

ribonucleoside triphosphate phosphatase activity [inference]

ATP hydrolysis activity

catalytic activity, acting on a nucleic acid [inference]

helicase activity

catalytic activity, acting on DNA [inference]

ATP-dependent activity, acting on DNA [inference]

ATP-dependent chromatin remodeler activity

binding [inference]

protein binding

small molecule binding [inference]

heterocyclic compound binding [inference]

nucleotide binding [inference]

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ion binding [inference]

anion binding [inference]

purine ribonucleoside triphosphate binding [inference]

ATP binding

protein-containing complex binding [inference]

chromatin binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

DNA binding

nucleoside phosphate binding [inference]

nucleotide binding [inference]

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

purine ribonucleoside triphosphate binding [inference]

ATP binding

carbohydrate derivative binding [inference]

ribonucleotide binding [inference]

purine ribonucleotide binding [inference]

adenyl ribonucleotide binding [inference]

ATP binding

ATP-dependent activity [inference]

helicase activity

ATP-dependent activity, acting on DNA [inference]

ATP-dependent chromatin remodeler activity

Gene Ontology information from NCBI Gene and UniProt.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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