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Plant invertase/pectin methylesterase inhibitor superfamily

Summary

Gene Symbol

VGD1

Organism

Arabidopsis thaliana (thale cress)

External Links

NCBI Gene: 819318
PubChem: 819318

Annotation

Keyword

Aspartyl esterase
Cell membrane
Cell wall
Cell wall biogenesis/degradation
Glycoprotein
Golgi apparatus
Reference proteome
Signal

Proteins

Displaying 1 entry
UniProt	Protein Name
Q5MFV8	Pectin methylesterase 5 Pectin methylesterase 67 Protein VANGUARD 1

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 3** entries
GO Term	Evidence Code	PMID
cell wall modification	IEA
pollen tube growth	TAS	15659637
pectin catabolic process	IEA

GO Hierarchy

biological process

metabolic process [inference]

catabolic process [inference]

organic substance catabolic process [inference]

macromolecule catabolic process [inference]

polysaccharide catabolic process [inference]

pectin catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

pectin catabolic process

primary metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide catabolic process [inference]

pectin catabolic process

galacturonan metabolic process [inference]

pectin metabolic process [inference]

pectin catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

pectin catabolic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide catabolic process [inference]

pectin catabolic process

galacturonan metabolic process [inference]

pectin metabolic process [inference]

pectin catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

pectin catabolic process

macromolecule metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide catabolic process [inference]

pectin catabolic process

galacturonan metabolic process [inference]

pectin metabolic process [inference]

pectin catabolic process

macromolecule catabolic process [inference]

polysaccharide catabolic process [inference]

pectin catabolic process

organic substance catabolic process [inference]

macromolecule catabolic process [inference]

polysaccharide catabolic process [inference]

pectin catabolic process

carbohydrate catabolic process [inference]

polysaccharide catabolic process [inference]

pectin catabolic process

cellular process [inference]

cell growth [inference]

unidimensional cell growth [inference]

cell tip growth [inference]

pollen tube growth

developmental cell growth [inference]

pollen tube growth

cell wall organization or biogenesis [inference]

cell wall organization [inference]

cell wall modification

cellular component organization or biogenesis [inference]

cellular component organization [inference]

external encapsulating structure organization [inference]

cell wall organization [inference]

cell wall modification

reproductive process [inference]

developmental process involved in reproduction [inference]

pollen tube growth

developmental process [inference]

developmental process involved in reproduction [inference]

pollen tube growth

anatomical structure morphogenesis [inference]

cell morphogenesis [inference]

unidimensional cell growth [inference]

cell tip growth [inference]

pollen tube growth

growth [inference]

cell growth [inference]

unidimensional cell growth [inference]

cell tip growth [inference]

pollen tube growth

developmental cell growth [inference]

pollen tube growth

developmental growth [inference]

developmental cell growth [inference]

pollen tube growth

developmental growth involved in morphogenesis [inference]

unidimensional cell growth [inference]

cell tip growth [inference]

pollen tube growth

Displaying **all 4** entries
GO Term	Evidence Code	PMID
plasma membrane
extracellular region	ISM
pollen tube	IDA	15659637
Golgi membrane	IDA	19144003

GO Hierarchy

cellular component

cellular anatomical entity [inference]

extracellular region

membrane [inference]

plasma membrane

organelle membrane [inference]

bounding membrane of organelle [inference]

Golgi membrane

cell projection [inference]

plasma membrane bounded cell projection [inference]

pollen tube

Displaying **all 3** entries
GO Term	Evidence Code	PMID
protein binding	IPI	19144003
pectinesterase activity	IMP	19144003
enzyme inhibitor activity	IEA

GO Hierarchy

molecular function

catalytic activity [inference]

hydrolase activity [inference]

hydrolase activity, acting on ester bonds [inference]

carboxylic ester hydrolase activity [inference]

pectinesterase activity

binding [inference]

protein binding

molecular function regulator activity [inference]

enzyme regulator activity [inference]

enzyme inhibitor activity

molecular function inhibitor activity [inference]

enzyme inhibitor activity

Gene Ontology information from NCBI Gene and UniProt.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

GlyCosmos Portal v4.1.0

Last updated: December 9, 2024

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