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GDP-L-galactose phosphorylase 1

Summary

Gene Symbol

VTC2

Organism

Arabidopsis thaliana (thale cress)

External Links

NCBI Gene: 828792
PubChem: 828792

Annotation

Keyword

Ascorbate biosynthesis
Cytoplasm
Guanine-nucleotide releasing factor
Hydrolase
Nucleotide-binding
Nucleotidyltransferase
Nucleus
Reference proteome

Proteins

Displaying 1 entry
UniProt	Protein Name
Q8RWE8	Protein VITAMIN C DEFECTIVE 2

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **6 - 7** of 7 in total

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GO Term	Evidence Code	PMID
response to jasmonic acid	IEP	16262714
defense response by callose deposition in cell wall	IMP	19095898

GO Hierarchy

biological process

metabolic process [inference]

biosynthetic process [inference]

cellular biosynthetic process [inference]

vitamin biosynthetic process [inference]

water-soluble vitamin biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

heterocycle biosynthetic process [inference]

lactone biosynthetic process [inference]

L-ascorbic acid biosynthetic process

small molecule biosynthetic process [inference]

vitamin biosynthetic process [inference]

water-soluble vitamin biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

monosaccharide biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic substance biosynthetic process [inference]

carbohydrate biosynthetic process [inference]

monosaccharide biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic cyclic compound biosynthetic process [inference]

lactone biosynthetic process [inference]

L-ascorbic acid biosynthetic process

cellular metabolic process [inference]

organic acid metabolic process [inference]

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

L-ascorbic acid metabolic process

L-ascorbic acid biosynthetic process

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

cellular biosynthetic process [inference]

vitamin biosynthetic process [inference]

water-soluble vitamin biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

heterocycle biosynthetic process [inference]

lactone biosynthetic process [inference]

L-ascorbic acid biosynthetic process

heterocycle metabolic process [inference]

heterocycle biosynthetic process [inference]

lactone biosynthetic process [inference]

L-ascorbic acid biosynthetic process

lactone metabolic process [inference]

L-ascorbic acid metabolic process

L-ascorbic acid biosynthetic process

lactone biosynthetic process [inference]

L-ascorbic acid biosynthetic process

primary metabolic process [inference]

carbohydrate metabolic process [inference]

monosaccharide metabolic process [inference]

hexose metabolic process [inference]

glucose metabolic process

L-ascorbic acid metabolic process

L-ascorbic acid biosynthetic process

monosaccharide biosynthetic process [inference]

L-ascorbic acid biosynthetic process

carbohydrate biosynthetic process [inference]

monosaccharide biosynthetic process [inference]

L-ascorbic acid biosynthetic process

small molecule metabolic process [inference]

monosaccharide metabolic process [inference]

hexose metabolic process [inference]

glucose metabolic process

L-ascorbic acid metabolic process

L-ascorbic acid biosynthetic process

monosaccharide biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic acid metabolic process [inference]

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

L-ascorbic acid metabolic process

L-ascorbic acid biosynthetic process

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

vitamin metabolic process [inference]

water-soluble vitamin metabolic process [inference]

L-ascorbic acid metabolic process

L-ascorbic acid biosynthetic process

water-soluble vitamin biosynthetic process [inference]

L-ascorbic acid biosynthetic process

vitamin biosynthetic process [inference]

water-soluble vitamin biosynthetic process [inference]

L-ascorbic acid biosynthetic process

small molecule biosynthetic process [inference]

vitamin biosynthetic process [inference]

water-soluble vitamin biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

monosaccharide biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

monosaccharide metabolic process [inference]

hexose metabolic process [inference]

glucose metabolic process

L-ascorbic acid metabolic process

L-ascorbic acid biosynthetic process

monosaccharide biosynthetic process [inference]

L-ascorbic acid biosynthetic process

carbohydrate biosynthetic process [inference]

monosaccharide biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic acid metabolic process [inference]

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

L-ascorbic acid metabolic process

L-ascorbic acid biosynthetic process

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic cyclic compound metabolic process [inference]

lactone metabolic process [inference]

L-ascorbic acid metabolic process

L-ascorbic acid biosynthetic process

lactone biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic cyclic compound biosynthetic process [inference]

lactone biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic substance biosynthetic process [inference]

carbohydrate biosynthetic process [inference]

monosaccharide biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic cyclic compound biosynthetic process [inference]

lactone biosynthetic process [inference]

L-ascorbic acid biosynthetic process

cellular process [inference]

cellular metabolic process [inference]

organic acid metabolic process [inference]

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

oxoacid metabolic process [inference]

carboxylic acid metabolic process [inference]

L-ascorbic acid metabolic process

L-ascorbic acid biosynthetic process

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

cellular biosynthetic process [inference]

vitamin biosynthetic process [inference]

water-soluble vitamin biosynthetic process [inference]

L-ascorbic acid biosynthetic process

organic acid biosynthetic process [inference]

carboxylic acid biosynthetic process [inference]

L-ascorbic acid biosynthetic process

heterocycle biosynthetic process [inference]

lactone biosynthetic process [inference]

L-ascorbic acid biosynthetic process

heterocycle metabolic process [inference]

heterocycle biosynthetic process [inference]

lactone biosynthetic process [inference]

L-ascorbic acid biosynthetic process

lactone metabolic process [inference]

L-ascorbic acid metabolic process

L-ascorbic acid biosynthetic process

lactone biosynthetic process [inference]

L-ascorbic acid biosynthetic process

cellular localization [inference]

cellular macromolecule localization [inference]

callose deposition in cell wall [inference]

defense response by callose deposition in cell wall

cellular response to stimulus [inference]

cellular response to stress [inference]

defense response by cell wall thickening [inference]

defense response by callose deposition in cell wall

cell wall organization or biogenesis [inference]

cell wall organization [inference]

cell wall modification [inference]

cell wall thickening [inference]

defense response by cell wall thickening [inference]

defense response by callose deposition in cell wall

callose deposition in cell wall [inference]

defense response by callose deposition in cell wall

cellular component organization or biogenesis [inference]

cellular component organization [inference]

external encapsulating structure organization [inference]

cell wall organization [inference]

cell wall modification [inference]

cell wall thickening [inference]

defense response by cell wall thickening [inference]

defense response by callose deposition in cell wall

callose deposition in cell wall [inference]

defense response by callose deposition in cell wall

biological process involved in interspecies interaction between organisms [inference]

response to other organism [inference]

response to bacterium [inference]

defense response to bacterium

defense response to other organism [inference]

defense response to bacterium

response to stimulus [inference]

response to stress [inference]

defense response [inference]

defense response by cell wall thickening [inference]

defense response by callose deposition in cell wall

defense response by callose deposition [inference]

defense response by callose deposition in cell wall

defense response to other organism [inference]

defense response to bacterium

response to heat

cellular response to stress [inference]

defense response by cell wall thickening [inference]

defense response by callose deposition in cell wall

response to external stimulus [inference]

response to external biotic stimulus [inference]

response to other organism [inference]

response to bacterium [inference]

defense response to bacterium

defense response to other organism [inference]

defense response to bacterium

response to biotic stimulus [inference]

response to external biotic stimulus [inference]

response to other organism [inference]

response to bacterium [inference]

defense response to bacterium

defense response to other organism [inference]

defense response to bacterium

response to abiotic stimulus [inference]

response to temperature stimulus [inference]

response to heat

response to endogenous stimulus [inference]

response to hormone [inference]

response to jasmonic acid

response to chemical [inference]

response to organic substance [inference]

response to hormone [inference]

response to jasmonic acid

response to carbohydrate [inference]

defense response by callose deposition [inference]

defense response by callose deposition in cell wall

response to lipid [inference]

response to fatty acid [inference]

response to jasmonic acid

response to oxygen-containing compound [inference]

response to carbohydrate [inference]

defense response by callose deposition [inference]

defense response by callose deposition in cell wall

response to fatty acid [inference]

response to jasmonic acid

cellular response to stimulus [inference]

cellular response to stress [inference]

defense response by cell wall thickening [inference]

defense response by callose deposition in cell wall

localization [inference]

macromolecule localization [inference]

polysaccharide localization [inference]

callose localization [inference]

defense response by callose deposition [inference]

defense response by callose deposition in cell wall

callose deposition in cell wall [inference]

defense response by callose deposition in cell wall

cellular macromolecule localization [inference]

callose deposition in cell wall [inference]

defense response by callose deposition in cell wall

cellular localization [inference]

cellular macromolecule localization [inference]

callose deposition in cell wall [inference]

defense response by callose deposition in cell wall

Displaying **all 2** entries
GO Term	Evidence Code	PMID
nucleus	ISM
cytoplasm

GO Hierarchy

cellular component

cellular anatomical entity [inference]

cytoplasm

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

Displaying entries **6 - 10** of 10 in total

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GO Term	Evidence Code	PMID
GDP-galactose:glucose-1-phosphate guanylyltransferase activity	IDA	17485667
GDP-L-galactose phosphorylase activity	IEA
GDP-D-glucose phosphorylase activity	IDA	18463094
mannose-1-phosphate guanylyltransferase (GDP) activity	IDA	17462988
nucleotide binding

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

glycosyltransferase activity [inference]

UDP-glycosyltransferase activity [inference]

UDP-glucosyltransferase activity [inference]

quercetin 4'-O-glucosyltransferase activity

hexosyltransferase activity [inference]

glucosyltransferase activity [inference]

UDP-glucosyltransferase activity [inference]

quercetin 4'-O-glucosyltransferase activity

transferase activity, transferring phosphorus-containing groups [inference]

nucleotidyltransferase activity [inference]

guanylyltransferase activity [inference]

hydrolase activity

binding [inference]

small molecule binding [inference]

heterocyclic compound binding [inference]

nucleotide binding

organic cyclic compound binding [inference]

nucleoside phosphate binding [inference]

nucleotide binding

molecular function regulator activity [inference]

enzyme regulator activity [inference]

nucleoside-triphosphatase regulator activity [inference]

GTPase regulator activity [inference]

guanyl-nucleotide exchange factor activity

Gene Ontology information from NCBI Gene and UniProt.

Rhea

phosphate + GDP-α-D-glucose

H⁺ + GDP + α-D-glucose 1-phosphate

Enzyme

PMID

21507950

α-D-mannose 1-phosphate + GDP-β-L-galactose

GDP-α-D-mannose + β-L-galactose 1-phosphate

Enzyme

2.7.7.69

PMID

phosphate + GDP-β-L-galactose

H⁺ + GDP + β-L-galactose 1-phosphate

Enzyme

2.7.7.69

PMID

α-D-mannose 1-phosphate + GDP-α-D-glucose

GDP-α-D-mannose + α-D-glucose 1-phosphate

Enzyme

2.7.7.69

PMID

α-D-glucose 1-phosphate + GDP-β-L-galactose

GDP-α-D-glucose + β-L-galactose 1-phosphate

Enzyme

2.7.7.69

PMID

17485667

LIPID MAPS Gene / Proteome Database

LMPD ID: LMP010239
Gene Name: GDP-L-galactose phosphorylase 1

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Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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Last updated: August 19, 2024