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Alpha-1,4-glucan-protein synthase family protein

Summary

Gene Symbol

RGP5

Organism

Arabidopsis thaliana (thale cress)

External Links

NCBI Gene: 831513
KEGG Gene ID: ath:AT5G16510
PubChem: 831513

Annotation

Keyword

Cell wall biogenesis/degradation
Cytoplasm
Glycoprotein
Golgi apparatus
Isomerase
Reference proteome
Transferase

Proteins

Displaying **all 3** entries
UniProt	Protein Name
Q9FFD2	Reversibly glycosylated polypeptide 5 UDP-L-arabinose mutase 5
A0A654G1R1
W8Q2T5

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 4** entries
GO Term	Evidence Code	PMID
plant-type cell wall biogenesis
cell wall organization
plant-type cell wall organization or biogenesis	IEA
UDP-L-arabinose metabolic process

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

phosphorus metabolic process [inference]

UDP-L-arabinose metabolic process

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

small molecule metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

organic substance metabolic process [inference]

carbohydrate derivative metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

organic cyclic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

cellular process [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

phosphorus metabolic process [inference]

UDP-L-arabinose metabolic process

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

cell wall organization or biogenesis [inference]

cell wall biogenesis [inference]

plant-type cell wall biogenesis

cell wall organization

plant-type cell wall organization or biogenesis

plant-type cell wall biogenesis

cellular component organization or biogenesis [inference]

cellular component organization [inference]

external encapsulating structure organization [inference]

cell wall organization

cellular component biogenesis [inference]

cell wall biogenesis [inference]

plant-type cell wall biogenesis

Displaying **all 4** entries
GO Term	Evidence Code	PMID
Golgi apparatus	IDA	21478444
plastid	HDA	28887381
plasmodesma	HDA	21533090
cytosol	HDA IDA	21478444 25293756

GO Hierarchy

cellular component

cellular anatomical entity [inference]

cytosol

cell junction [inference]

anchoring junction [inference]

cell-cell junction [inference]

plasmodesma

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

Displaying **all 4** entries
GO Term	Evidence Code	PMID
protein binding	IPI	21478444
UDP-arabinopyranose mutase activity	IDA	21478444
transferase activity
intramolecular transferase activity

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity

isomerase activity [inference]

intramolecular transferase activity

UDP-arabinopyranose mutase activity

binding [inference]

protein binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Alpha-1,4-glucan-protein synthase

Functional Category

E: Amino acid transport and metabolism
M: Cell wall/membrane/envelope biogenesis
T: Signal transduction mechanisms

Displaying **all 6** entries
Gene Ontology
UDP-L-arabinose metabolic process
UDP-arabinopyranose mutase activity
intramolecular transferase activity
isomerase activity
plant-type cell wall biogenesis
plant-type cell wall organization or biogenesis

Displaying **all 3** entries
InterPro
Nucleotide-diphospho-sugar transferases
Reversibly glycosylated polypeptide family
Reversibly glycosylated polypeptide

KEGG BRITE Database

Orthology

K13379

Name

reversibly glycosylated polypeptide / UDP-arabinopyranose mutase [EC:2.4.1.- 5.4.99.30]

References

Rhea

UDP-β-L-arabinofuranose

UDP-β-L-arabinopyranose

Enzyme

5.4.99.30

PMID

Ortholog

Displaying entries **1 - 10** of 13 in total

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Species	Gene ID	OrthoDB	Alliance of Genome Resources	Orthologous MAtrix
Arabidopsis lyrata subsp. lyrata	9309849	81972_0:004c88
Capsella rubella	17884093	81985_0:0047ca
Eutrema salsugineum	18019159	72664_0:003266
Brassica rapa	103846324	3711_0:000804
Camelina sativa	104705941	90675_0:006eea
Camelina sativa	104735683	90675_0:00cd1e
Camelina sativa	104769936	90675_0:013818
Tarenaya hassleriana	104827179	28532_0:0053a1
Brassica napus	106372005	3708_0:0097f4
Brassica napus	106372223	3708_0:014985

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Partly supported by NIH Common Fund Grant #1U01GM125267-01

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Last updated: December 9, 2024