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Cellulose synthase family protein

Summary

Gene Symbol

IRX3

Organism

Arabidopsis thaliana (thale cress)

External Links

NCBI Gene: 831608
KEGG Gene ID: ath:AT5G17420
PubChem: 831608

Annotation

Keyword

3D-structure
Acetylation
Cell membrane
Cell wall biogenesis/degradation
Cellulose biosynthesis
Coiled coil
Glycoprotein
Glycosyltransferase
Lipoprotein
Manganese
Phosphoprotein
Reference proteome
Transmembrane helix
Zinc-finger

Proteins

Displaying **all 3** entries
UniProt	Protein Name
Q9SWW6	Protein FRAGILE FIBER 5 Protein IRREGULAR XYLEM 3
A0A384LP57
W8PV01

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 5** entries
GO Term	Evidence Code	PMID
plant-type cell wall biogenesis	IMP	9301086
plant-type secondary cell wall biogenesis	IMP	10330464
cellulose biosynthetic process	IMP	10330464 12165296
rhamnogalacturonan I side chain metabolic process	IMP	17041031
cell wall thickening	IMP	20377682

GO Hierarchy

biological process

metabolic process [inference]

biosynthetic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cellular metabolic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

primary metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cell wall polysaccharide metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

galacturonan metabolic process [inference]

pectin metabolic process [inference]

cell wall pectin metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

glucan metabolic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

beta-glucan metabolic process [inference]

cellulose metabolic process [inference]

cellulose biosynthetic process

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cell wall polysaccharide metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

galacturonan metabolic process [inference]

pectin metabolic process [inference]

cell wall pectin metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

glucan metabolic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

beta-glucan metabolic process [inference]

cellulose metabolic process [inference]

cellulose biosynthetic process

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

macromolecule metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cell wall polysaccharide metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

galacturonan metabolic process [inference]

pectin metabolic process [inference]

cell wall pectin metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

glucan metabolic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

beta-glucan metabolic process [inference]

cellulose metabolic process [inference]

cellulose biosynthetic process

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cell wall macromolecule metabolic process [inference]

cell wall polysaccharide metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cellular process [inference]

cellular metabolic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cell wall organization or biogenesis [inference]

cell wall biogenesis [inference]

plant-type cell wall biogenesis

plant-type secondary cell wall biogenesis

cell wall organization [inference]

cell wall modification [inference]

cell wall thickening

plant-type cell wall organization or biogenesis [inference]

plant-type cell wall biogenesis

plant-type secondary cell wall biogenesis

cellular component organization or biogenesis [inference]

cellular component organization [inference]

external encapsulating structure organization [inference]

cell wall organization [inference]

cell wall modification [inference]

cell wall thickening

cellular component biogenesis [inference]

cell wall biogenesis [inference]

plant-type cell wall biogenesis

plant-type secondary cell wall biogenesis

Displaying **all 3** entries
GO Term	Evidence Code	PMID
cellulose synthase complex	IPI	12538856
plasma membrane	IDA ISM TAS	10330464 26450210
chloroplast	HDA	18431481

GO Hierarchy

cellular component

protein-containing complex [inference]

catalytic complex [inference]

transferase complex [inference]

cellulose synthase complex

cellular anatomical entity [inference]

membrane [inference]

plasma membrane

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

plastid [inference]

chloroplast

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

plastid [inference]

chloroplast

Displaying **all 4** entries
GO Term	Evidence Code	PMID
protein binding	IPI	19258017 19383897 27277162 32612234
metal ion binding
cellulose synthase activity	IMP ISS	10330464
cellulose synthase (UDP-forming) activity	IEA

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

glycosyltransferase activity [inference]

UDP-glycosyltransferase activity [inference]

UDP-glucosyltransferase activity [inference]

cellulose synthase (UDP-forming) activity

hexosyltransferase activity [inference]

glucosyltransferase activity [inference]

cellulose synthase activity

cellulose synthase (UDP-forming) activity

UDP-glucosyltransferase activity [inference]

cellulose synthase (UDP-forming) activity

binding [inference]

protein binding

ion binding [inference]

cation binding [inference]

metal ion binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

WD repeat

Functional Category

E: Amino acid transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 3** entries
InterPro
WD40 repeat
WD40-repeat-containing domain superfamily
WD40/YVTN repeat-like-containing domain superfamily

KEGG BRITE Database

Orthology

K10999

Name

cellulose synthase A [EC:2.4.1.12]

References

9445479

Rhea

RHEA:19929

UDP-α-D-glucose

H⁺ + UDP

Enzyme

2.4.1.12

PMID

Ortholog

Displaying entries **1 - 10** of 15 in total

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Species	Gene ID	OrthoDB
Arabidopsis lyrata subsp. lyrata	9307835	81972_0:004c4b
Capsella rubella	17882186	81985_0:0049e1
Eutrema salsugineum	18019227	72664_0:002e9f
Brassica rapa	103851106	3711_0:001c58
Brassica rapa	103856249	3711_0:002d34
Camelina sativa	104706034	90675_0:006ddd
Camelina sativa	104735780	90675_0:00cfbe
Camelina sativa	104770042	90675_0:01343e
Tarenaya hassleriana	104817819	28532_0:0034bd
Brassica napus	106386336	3708_0:00c04e