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Cellulose synthase family protein

Summary

Gene Symbol

IRX3

Organism

Arabidopsis thaliana (thale cress)

External Links

NCBI Gene: 831608
KEGG Gene ID: ath:AT5G17420
PubChem: 831608

Annotation

Keyword

3D-structure
Acetylation
Cell membrane
Cell wall biogenesis/degradation
Cellulose biosynthesis
Coiled coil
Glycoprotein
Glycosyltransferase
Lipoprotein
Manganese
Phosphoprotein
Reference proteome
Transmembrane helix
Zinc-finger

Proteins

Displaying 1 entry
UniProt	Protein Name
Q9SWW6	Protein FRAGILE FIBER 5 Protein IRREGULAR XYLEM 3

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 5** entries
GO Term	Evidence Code	PMID
plant-type cell wall biogenesis	IMP	9301086
plant-type secondary cell wall biogenesis	IMP	10330464
rhamnogalacturonan I side chain metabolic process	IMP	17041031
cellulose biosynthetic process	IMP	10330464 12165296
cell wall thickening	IMP	20377682

GO Hierarchy

biological process

metabolic process [inference]

biosynthetic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cellular metabolic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

primary metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cell wall polysaccharide metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

galacturonan metabolic process [inference]

pectin metabolic process [inference]

cell wall pectin metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

glucan metabolic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

beta-glucan metabolic process [inference]

cellulose metabolic process [inference]

cellulose biosynthetic process

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cell wall polysaccharide metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

galacturonan metabolic process [inference]

pectin metabolic process [inference]

cell wall pectin metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

glucan metabolic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

beta-glucan metabolic process [inference]

cellulose metabolic process [inference]

cellulose biosynthetic process

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

macromolecule metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cell wall polysaccharide metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

galacturonan metabolic process [inference]

pectin metabolic process [inference]

cell wall pectin metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

glucan metabolic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

beta-glucan metabolic process [inference]

cellulose metabolic process [inference]

cellulose biosynthetic process

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cell wall macromolecule metabolic process [inference]

cell wall polysaccharide metabolic process [inference]

rhamnogalacturonan I metabolic process [inference]

rhamnogalacturonan I side chain metabolic process

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cellular process [inference]

cellular metabolic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

glucan biosynthetic process [inference]

beta-glucan biosynthetic process [inference]

cellulose biosynthetic process

cell wall organization or biogenesis [inference]

cell wall biogenesis [inference]

plant-type cell wall biogenesis

plant-type secondary cell wall biogenesis

cell wall organization [inference]

cell wall modification [inference]

cell wall thickening

plant-type cell wall organization or biogenesis [inference]

plant-type cell wall biogenesis

plant-type secondary cell wall biogenesis

cellular component organization or biogenesis [inference]

cellular component organization [inference]

external encapsulating structure organization [inference]

cell wall organization [inference]

cell wall modification [inference]

cell wall thickening

cellular component biogenesis [inference]

cell wall biogenesis [inference]

plant-type cell wall biogenesis

plant-type secondary cell wall biogenesis

Displaying **all 5** entries
GO Term	Evidence Code	PMID
plasma membrane	ISM
plasma membrane	TAS	10330464
plasma membrane	IDA	26450210
chloroplast	HDA	18431481
cellulose synthase complex	IPI	12538856

GO Hierarchy

cellular component

protein-containing complex [inference]

catalytic complex [inference]

transferase complex [inference]

cellulose synthase complex

cellular anatomical entity [inference]

membrane [inference]

plasma membrane

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

plastid [inference]

chloroplast

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

plastid [inference]

chloroplast

Displaying **all 5** entries
GO Term	Evidence Code	PMID
protein binding	IPI	19258017 19383897 27277162 32612234
cellulose synthase activity	ISS
cellulose synthase activity	IMP	10330464
cellulose synthase (UDP-forming) activity
metal ion binding

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

glycosyltransferase activity [inference]

UDP-glycosyltransferase activity [inference]

UDP-glucosyltransferase activity [inference]

cellulose synthase (UDP-forming) activity

hexosyltransferase activity [inference]

glucosyltransferase activity [inference]

cellulose synthase activity

cellulose synthase (UDP-forming) activity

UDP-glucosyltransferase activity [inference]

cellulose synthase (UDP-forming) activity

binding [inference]

protein binding

ion binding [inference]

cation binding [inference]

metal ion binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

cellulose synthase

Functional Category

E: Amino acid transport and metabolism
N: Cell motility
T: Signal transduction mechanisms

Displaying **all 5** entries
Gene Ontology
cellulose synthase (UDP-forming) activity
cellulose synthase activity
metal ion binding
plant-type primary cell wall biogenesis
transferase activity

Displaying **all 5** entries
InterPro
Cellulose synthase, RING-type zinc finger
Cellulose synthase
Nucleotide-diphospho-sugar transferases
Zinc finger, RING-type
Zinc finger, RING/FYVE/PHD-type