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reversibly glycosylated polypeptide 4

Summary

Gene Symbol

RGP4

Organism

Arabidopsis thaliana (thale cress)

External Links

NCBI Gene: 835147
KEGG Gene ID: ath:AT5G50750
PubChem: 835147

Annotation

Keyword

Cell wall biogenesis/degradation
Cytoplasm
Glycoprotein
Golgi apparatus
Isomerase
Reference proteome
Transferase

Proteins

Displaying **all 3** entries
UniProt	Protein Name
A0A384KVV6
W8QN51
Q9LUE6	Reversibly glycosylated polypeptide 4 UDP-L-arabinose mutase 4

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 4** entries
GO Term	Evidence Code	PMID
plant-type cell wall biogenesis
cell wall organization
plant-type cell wall organization or biogenesis	IEA
UDP-L-arabinose metabolic process

GO Hierarchy

biological process

metabolic process [inference]

nitrogen compound metabolic process [inference]

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

phosphorus metabolic process [inference]

UDP-L-arabinose metabolic process

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

primary metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

small molecule metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

organic substance metabolic process [inference]

carbohydrate derivative metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

organic cyclic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

cellular process [inference]

cellular metabolic process [inference]

cellular aromatic compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

phosphorus metabolic process [inference]

UDP-L-arabinose metabolic process

cellular nitrogen compound metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

heterocycle metabolic process [inference]

nucleobase-containing compound metabolic process [inference]

nucleobase-containing small molecule metabolic process [inference]

nucleotide-sugar metabolic process [inference]

UDP-L-arabinose metabolic process

cell wall organization or biogenesis [inference]

cell wall biogenesis [inference]

plant-type cell wall biogenesis

cell wall organization

plant-type cell wall organization or biogenesis

plant-type cell wall biogenesis

cellular component organization or biogenesis [inference]

cellular component organization [inference]

external encapsulating structure organization [inference]

cell wall organization

cellular component biogenesis [inference]

cell wall biogenesis [inference]

plant-type cell wall biogenesis

Displaying **all 4** entries
GO Term	Evidence Code	PMID
Golgi apparatus	IDA	21478444
plastid	HDA	28887381
cytosol	HDA IDA	21478444 25293756
cytoplasm	ISM

GO Hierarchy

cellular component

cellular anatomical entity [inference]

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

Displaying **all 4** entries
GO Term	Evidence Code	PMID
protein binding	IPI	21478444
UDP-arabinopyranose mutase activity	IDA	21478444
transferase activity
intramolecular transferase activity

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity

isomerase activity [inference]

intramolecular transferase activity

UDP-arabinopyranose mutase activity

binding [inference]

protein binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Alpha-1,4-glucan-protein synthase

Functional Category

E: Amino acid transport and metabolism
M: Cell wall/membrane/envelope biogenesis
T: Signal transduction mechanisms

Displaying **all 6** entries
Gene Ontology
UDP-L-arabinose metabolic process
UDP-arabinopyranose mutase activity
intramolecular transferase activity
isomerase activity
plant-type cell wall biogenesis
plant-type cell wall organization or biogenesis

Displaying **all 3** entries
InterPro
Nucleotide-diphospho-sugar transferases
Reversibly glycosylated polypeptide family
Reversibly glycosylated polypeptide

KEGG BRITE Database

Orthology

K13379

Name

reversibly glycosylated polypeptide / UDP-arabinopyranose mutase [EC:2.4.1.- 5.4.99.30]

References

Rhea

UDP-β-L-arabinofuranose

UDP-β-L-arabinopyranose

Enzyme

5.4.99.30

PMID

Ortholog

Displaying entries **1 - 10** of 12 in total

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Species	Gene ID	OrthoDB	Alliance of Genome Resources	Orthologous MAtrix
Arabidopsis lyrata subsp. lyrata	9299063	81972_0:007175
Arabidopsis lyrata subsp. lyrata	9300149	81972_0:0065b0
Capsella rubella	17876608	81985_0:006461
Eutrema salsugineum	18018009	72664_0:00374b
Brassica rapa	103858454	3711_0:003144
Camelina sativa	104725342	90675_0:0018a9
Camelina sativa	104725576	90675_0:00b113
Tarenaya hassleriana	104810630	28532_0:001d90
Brassica napus	106385533	3708_0:003129
Brassica napus	106388463	3708_0:00c221

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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Last updated: December 9, 2024