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glyceraldehyde-3-phosphate dehydrogenase B subunit

Summary

Gene Symbol

GAPB

Organism

Arabidopsis thaliana (thale cress)

External Links

NCBI Gene: 840895
PubChem: 840895

Annotation

Keyword

Calvin cycle
Chloroplast
Membrane
NADP
Oxidoreductase
Reference proteome
Transit peptide

Proteins

Displaying **all 2** entries
UniProt	Protein Name
A0A5S9WM95
P25857	NADP-dependent glyceraldehydephosphate dehydrogenase B

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 5** entries
GO Term	Evidence Code	PMID
reductive pentose-phosphate cycle	IEA NAS	15533878
response to cold	IEP	16923014
response to sucrose	IEP	15533878
response to light stimulus	IEP	15533878
glucose metabolic process	IEA

GO Hierarchy

biological process

metabolic process [inference]

biosynthetic process [inference]

organic substance biosynthetic process [inference]

carbohydrate biosynthetic process [inference]

photosynthesis, dark reaction [inference]

reductive pentose-phosphate cycle

primary metabolic process [inference]

carbohydrate metabolic process [inference]

monosaccharide metabolic process [inference]

hexose metabolic process [inference]

glucose metabolic process

carbohydrate biosynthetic process [inference]

photosynthesis, dark reaction [inference]

reductive pentose-phosphate cycle

small molecule metabolic process [inference]

monosaccharide metabolic process [inference]

hexose metabolic process [inference]

glucose metabolic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

monosaccharide metabolic process [inference]

hexose metabolic process [inference]

glucose metabolic process

carbohydrate biosynthetic process [inference]

photosynthesis, dark reaction [inference]

reductive pentose-phosphate cycle

organic substance biosynthetic process [inference]

carbohydrate biosynthetic process [inference]

photosynthesis, dark reaction [inference]

reductive pentose-phosphate cycle

response to stimulus [inference]

response to stress [inference]

response to cold

response to abiotic stimulus [inference]

response to temperature stimulus [inference]

response to cold

response to radiation [inference]

response to light stimulus

response to chemical [inference]

response to organic substance [inference]

response to carbohydrate [inference]

response to disaccharide [inference]

response to sucrose

response to oxygen-containing compound [inference]

response to carbohydrate [inference]

response to disaccharide [inference]

response to sucrose

Displaying entries **1 - 5** of 9 in total

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GO Term	Evidence Code	PMID
stromule	IDA	16923014
chloroplast envelope	HDA	12766230 12938931 20061580
chloroplast stroma	HDA	16207701 18633119 20061580
chloroplast	HDA ISM ISS	1398114 18431481 25293756
apoplast	HDA	18538804

GO Hierarchy

cellular component

cellular anatomical entity [inference]

extracellular region [inference]

apoplast

cytosol

plastid stroma [inference]

chloroplast stroma

stromule

membrane [inference]

outer membrane [inference]

organelle outer membrane [inference]

chloroplast thylakoid membrane

organelle membrane [inference]

plastid membrane [inference]

chloroplast membrane

plastid thylakoid membrane [inference]

chloroplast thylakoid membrane

bounding membrane of organelle [inference]

organelle outer membrane [inference]

chloroplast thylakoid membrane

photosynthetic membrane [inference]

thylakoid membrane [inference]

plastid thylakoid membrane [inference]

chloroplast thylakoid membrane

envelope [inference]

organelle envelope [inference]

plastid envelope [inference]

chloroplast envelope

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

plastid [inference]

chloroplast

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

plastid [inference]

chloroplast

Displaying entries **1 - 5** of 6 in total

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GO Term	Evidence Code	PMID
NADP binding	IEA
NAD binding	IEA
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	NAS	16258009
mRNA binding	IDA	32344669
glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	IEA ISS	1398114

GO Hierarchy

molecular function

catalytic activity [inference]

oxidoreductase activity [inference]

oxidoreductase activity, acting on the aldehyde or oxo group of donors [inference]

oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [inference]

glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity [inference]

binding [inference]

small molecule binding [inference]

organic acid binding [inference]

carboxylic acid binding [inference]

monocarboxylic acid binding [inference]

salicylic acid binding

heterocyclic compound binding [inference]

nucleotide binding [inference]

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

ion binding [inference]

anion binding [inference]

carboxylic acid binding [inference]

monocarboxylic acid binding [inference]

salicylic acid binding

organic cyclic compound binding [inference]

nucleic acid binding [inference]

RNA binding [inference]

mRNA binding

salicylic acid binding

nucleoside phosphate binding [inference]

nucleotide binding [inference]

purine nucleotide binding [inference]

adenyl nucleotide binding [inference]

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Glyceraldehyde-3-phosphate dehydrogenase

Functional Category

E: Amino acid transport and metabolism
G: Carbohydrate transport and metabolism
T: Signal transduction mechanisms

Displaying **all 6** entries
Gene Ontology
NADP binding
glucose metabolic process
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
nucleotide binding
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
oxidoreductase activity

Displaying **all 6** entries
InterPro
Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
Glyceraldehyde 3-phosphate dehydrogenase, active site
Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
Glyceraldehyde-3-phosphate dehydrogenase, type I
Glyceraldehyde/Erythrose phosphate dehydrogenase family
NAD(P)-binding domain superfamily

Ortholog

Displaying entries **1 - 10** of 12 in total

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Species	Gene ID	OrthoDB
Arabidopsis lyrata subsp. lyrata	9327306	81972_0:00020e
Capsella rubella	17898235	81985_0:000178
Eutrema salsugineum	18012616	72664_0:0055b0
Brassica rapa	103833307	3711_0:007aa2
Camelina sativa	104757901	90675_0:010b61
Camelina sativa	104777631	90675_0:002083
Tarenaya hassleriana	104813182	28532_0:002530
Brassica napus	106361259	3708_0:006dd8
Brassica napus	106405503	3708_0:01287a
Raphanus sativus	108822559	3726_0:008ed8