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Aldolase-type TIM barrel family protein

Summary

Gene Symbol

AtkdsA1

Organism

Arabidopsis thaliana (thale cress)

External Links

NCBI Gene: 844288
PubChem: 844288

Annotation

Keyword

Acetylation
Alternative splicing
Cell wall biogenesis/degradation
Cytoplasm
Reference proteome
Transferase

Proteins

Displaying **all 2** entries
UniProt	Protein Name
A0A178W4C4
Q9AV97	3-deoxy-D-manno-octulosonic acid 8-phosphate synthase KDO-8-phosphate synthase 1 Phospho-2-dehydro-3-deoxyoctonate aldolase

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 4** entries
GO Term	Evidence Code	PMID
rhamnogalacturonan II biosynthetic process	TAS	12754267 18503041
pollen tube development	IMP	18503041
pollen tube growth	IMP	18503041
monosaccharide biosynthetic process	IDA	18503041

GO Hierarchy

biological process

metabolic process [inference]

biosynthetic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

small molecule biosynthetic process [inference]

monosaccharide biosynthetic process

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

monosaccharide biosynthetic process

cellular metabolic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

primary metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide metabolic process [inference]

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

galacturonan metabolic process [inference]

rhamnogalacturonan II metabolic process [inference]

rhamnogalacturonan II biosynthetic process

pectin metabolic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall pectin metabolic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

monosaccharide metabolic process [inference]

monosaccharide biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

monosaccharide biosynthetic process

small molecule metabolic process [inference]

monosaccharide metabolic process [inference]

monosaccharide biosynthetic process

small molecule biosynthetic process [inference]

monosaccharide biosynthetic process

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide metabolic process [inference]

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

galacturonan metabolic process [inference]

rhamnogalacturonan II metabolic process [inference]

rhamnogalacturonan II biosynthetic process

pectin metabolic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall pectin metabolic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

monosaccharide metabolic process [inference]

monosaccharide biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

monosaccharide biosynthetic process

macromolecule metabolic process [inference]

polysaccharide metabolic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide metabolic process [inference]

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

galacturonan metabolic process [inference]

rhamnogalacturonan II metabolic process [inference]

rhamnogalacturonan II biosynthetic process

pectin metabolic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall pectin metabolic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall macromolecule metabolic process [inference]

cell wall polysaccharide metabolic process [inference]

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

organic substance biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

carbohydrate biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

monosaccharide biosynthetic process

cellular process [inference]

cell growth [inference]

unidimensional cell growth [inference]

cell tip growth [inference]

pollen tube growth

developmental cell growth [inference]

pollen tube growth

cellular metabolic process [inference]

cellular biosynthetic process [inference]

macromolecule biosynthetic process [inference]

polysaccharide biosynthetic process [inference]

pectin biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

cell wall polysaccharide biosynthetic process [inference]

cell wall pectin biosynthetic process [inference]

rhamnogalacturonan II biosynthetic process

reproductive process [inference]

developmental process involved in reproduction [inference]

developmental process [inference]

developmental process involved in reproduction [inference]

anatomical structure morphogenesis [inference]

cell morphogenesis [inference]

unidimensional cell growth [inference]

cell tip growth [inference]

pollen tube growth

anatomical structure development [inference]

pollen tube development

growth [inference]

cell growth [inference]

unidimensional cell growth [inference]

cell tip growth [inference]

pollen tube growth

developmental cell growth [inference]

pollen tube growth

developmental growth [inference]

developmental cell growth [inference]

pollen tube growth

developmental growth involved in morphogenesis [inference]

unidimensional cell growth [inference]

cell tip growth [inference]

pollen tube growth

Displaying **all 2** entries
GO Term	Evidence Code	PMID
cytoplasm	ISM
cytosol

GO Hierarchy

cellular component

cellular anatomical entity [inference]

Displaying 1 entry
GO Term	Evidence Code	PMID
3-deoxy-8-phosphooctulonate synthase activity	IDA	12754267 18503041

GO Hierarchy

molecular function

catalytic activity [inference]

transferase activity [inference]

transferase activity, transferring alkyl or aryl (other than methyl) groups [inference]

3-deoxy-8-phosphooctulonate synthase activity

Gene Ontology information from NCBI Gene and UniProt.

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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