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Golgi transport complex subunit COG4

Summary

Gene Symbol

COG4

Organism

Saccharomyces cerevisiae S288C

External Links

NCBI Gene

856220

KEGG Gene ID

sce:YPR105C

PubChem

856220

Alliance of Genome Resources

SGD:S000006309

Annotation

Keyword

Golgi apparatus
Membrane
Protein transport
Reference proteome

Proteins

Displaying 1 entry
UniProt	Protein Name
Q06096	Component of oligomeric Golgi complex 4 Protein SEC38

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 6 in total

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GO Term	Evidence Code	PMID
retrograde transport, vesicle recycling within Golgi	IMP	11703943
protein transport	IEA
cytoplasm to vacuole transport by the Cvt pathway	IMP	20065092
intra-Golgi vesicle-mediated transport	IMP	11703943
macroautophagy	IMP	20065092

GO Hierarchy

biological process

metabolic process [inference]

catabolic process [inference]

cellular catabolic process [inference]

autophagy [inference]

macroautophagy

pexophagy

autophagy of peroxisome [inference]

pexophagy

cellular metabolic process [inference]

cellular catabolic process [inference]

autophagy [inference]

macroautophagy

pexophagy

autophagy of peroxisome [inference]

pexophagy

cellular process [inference]

vesicle-mediated transport [inference]

Golgi vesicle transport [inference]

intra-Golgi vesicle-mediated transport

retrograde transport, vesicle recycling within Golgi

cellular metabolic process [inference]

cellular catabolic process [inference]

autophagy [inference]

macroautophagy

pexophagy

autophagy of peroxisome [inference]

pexophagy

cellular localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

protein localization to organelle [inference]

establishment of protein localization to organelle [inference]

establishment of protein localization to vacuole [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

protein localization to vacuole [inference]

establishment of protein localization to vacuole [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

establishment of protein localization [inference]

protein targeting [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

protein transport

establishment of protein localization to organelle [inference]

establishment of protein localization to vacuole [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

process utilizing autophagic mechanism [inference]

autophagy [inference]

macroautophagy

pexophagy

autophagy of peroxisome [inference]

pexophagy

cytoplasm to vacuole transport by the Cvt pathway

localization [inference]

macromolecule localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

protein localization to organelle [inference]

establishment of protein localization to organelle [inference]

establishment of protein localization to vacuole [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

protein localization to vacuole [inference]

establishment of protein localization to vacuole [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

establishment of protein localization [inference]

protein targeting [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

protein transport

establishment of protein localization to organelle [inference]

establishment of protein localization to vacuole [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

establishment of localization [inference]

transport [inference]

vesicle-mediated transport [inference]

Golgi vesicle transport [inference]

intra-Golgi vesicle-mediated transport

retrograde transport, vesicle recycling within Golgi

organic substance transport [inference]

protein transport

nitrogen compound transport [inference]

protein transport

establishment of protein localization [inference]

protein targeting [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

protein transport

establishment of protein localization to organelle [inference]

establishment of protein localization to vacuole [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

cellular localization [inference]

cellular macromolecule localization [inference]

protein localization [inference]

protein localization to organelle [inference]

establishment of protein localization to organelle [inference]

establishment of protein localization to vacuole [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

protein localization to vacuole [inference]

establishment of protein localization to vacuole [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

establishment of protein localization [inference]

protein targeting [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

protein transport

establishment of protein localization to organelle [inference]

establishment of protein localization to vacuole [inference]

protein targeting to vacuole [inference]

cytoplasm to vacuole transport by the Cvt pathway

Displaying **all 5** entries
GO Term	Evidence Code	PMID
membrane	IEA
Golgi apparatus	IEA
Golgi membrane	IEA
Golgi transport complex	IMP	11703943
cytosol	HDA	26928762

GO Hierarchy

cellular component

protein-containing complex [inference]

vesicle tethering complex [inference]

Golgi transport complex

cellular anatomical entity [inference]

cytosol

membrane

organelle membrane [inference]

bounding membrane of organelle [inference]

Golgi membrane

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

Golgi apparatus

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

Golgi apparatus

Displaying 1 entry
GO Term	Evidence Code	PMID
molecular_function	ND

GO Hierarchy

molecular function

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Xylosidase

Functional Category

E: Amino acid transport and metabolism
G: Carbohydrate transport and metabolism
P: Inorganic ion transport and metabolism

Displaying **all 2** entries
Gene Ontology
hydrolase activity, acting on glycosyl bonds
hydrolase activity

Displaying **all 7** entries
InterPro
Fibronectin type III-like domain
Glycoside hydrolase family 3 C-terminal domain superfamily
Glycoside hydrolase family 3 C-terminal domain
Glycoside hydrolase superfamily
Glycoside hydrolase, family 3, N-terminal domain superfamily
Glycoside hydrolase, family 3, N-terminal
Immunoglobulin-like fold

KEGG BRITE Database

Orthology

K20291

Name

conserved oligomeric Golgi complex subunit 4

References

11929878

Alliance of Genome Resources

Expression

Displaying 1 entry
Location	References
cytosol	PMID:26928762

Disease

Disease Ontology

Displaying **all 2** entries
DO ID	Disease Name	Source
DOID:0070262	congenital disorder of glycosylation type IIj	Alliance of Genome Resources
DOID:0111673	Saul-Wilson syndrome	Alliance of Genome Resources

Ortholog

Displaying entries **11 - 20** of 29 in total

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Species	Gene ID	OrthoDB
Lachancea thermotolerans CBS 6340	8295077	559295_0:0006a3
Eremothecium cymbalariae DBVPG#7215	11470736	931890_0:000470
Naumovozyma dairenensis CBS 421	11493893	1071378_0:000227
Torulaspora delbrueckii	11500780	4950_0:0008b6
Naumovozyma castellii CBS 4309	11529516	1064592_0:000378
Tetrapisispora phaffii CBS 4417	11532984	1071381_0:000eb8
Kazachstania africana CBS 2517	13882396	1071382_0:00091a
Tetrapisispora blattae CBS 6284	14496826	1071380_0:000ea0
Eremothecium sinecaudum	28721997	45286_0:0001c0
Saccharomyces eubayanus	28934685	1080349_0:0014a1

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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Summary

External Links

Annotation

OrthoDB (Group)

KEGG BRITE Database

International Collaboration

Acknowledgements