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L-ribulose-5-phosphate 4-epimerase

Summary

Gene Symbol

araD

Organism

Bacillus subtilis subsp. subtilis str. 168

External Links

NCBI Gene: 937894
PubChem: 937894

Annotation

Keyword

Arabinose catabolism
Isomerase
Metal-binding
Reference proteome
Zinc

Proteins

Displaying **all 2** entries
UniProt	Protein Name
P94525	Phosphoribulose isomerase
A0A6M3ZF01

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 2** entries
GO Term	Evidence Code	PMID
pentose catabolic process
L-arabinose catabolic process to xylulose 5-phosphate

GO Hierarchy

biological process

metabolic process [inference]

catabolic process [inference]

small molecule catabolic process [inference]

monosaccharide catabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

organic substance catabolic process [inference]

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

biosynthetic process [inference]

organic substance biosynthetic process [inference]

organophosphate biosynthetic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

carbohydrate derivative biosynthetic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

cellular metabolic process [inference]

phosphorus metabolic process [inference]

phosphate-containing compound metabolic process [inference]

xylulose 5-phosphate metabolic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

organophosphate metabolic process [inference]

xylulose 5-phosphate metabolic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

organophosphate biosynthetic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

primary metabolic process [inference]

carbohydrate metabolic process [inference]

monosaccharide metabolic process [inference]

pentose metabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

arabinose metabolic process [inference]

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

L-arabinose metabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

monosaccharide catabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

small molecule metabolic process [inference]

monosaccharide metabolic process [inference]

pentose metabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

arabinose metabolic process [inference]

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

L-arabinose metabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

monosaccharide catabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

small molecule catabolic process [inference]

monosaccharide catabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

organic substance metabolic process [inference]

carbohydrate metabolic process [inference]

monosaccharide metabolic process [inference]

pentose metabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

arabinose metabolic process [inference]

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

L-arabinose metabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

monosaccharide catabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

organophosphate metabolic process [inference]

xylulose 5-phosphate metabolic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

organophosphate biosynthetic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

carbohydrate derivative metabolic process [inference]

xylulose 5-phosphate metabolic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

carbohydrate derivative biosynthetic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

organic substance catabolic process [inference]

carbohydrate catabolic process [inference]

monosaccharide catabolic process [inference]

pentose catabolic process

arabinose catabolic process [inference]

L-arabinose catabolic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

organic substance biosynthetic process [inference]

organophosphate biosynthetic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

carbohydrate derivative biosynthetic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

cellular process [inference]

cellular metabolic process [inference]

phosphorus metabolic process [inference]

phosphate-containing compound metabolic process [inference]

xylulose 5-phosphate metabolic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

organophosphate metabolic process [inference]

xylulose 5-phosphate metabolic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

organophosphate biosynthetic process [inference]

xylulose 5-phosphate biosynthetic process [inference]

L-arabinose catabolic process to xylulose 5-phosphate

Displaying 1 entry
GO Term	Evidence Code	PMID
cytosol

GO Hierarchy

cellular component

cellular anatomical entity [inference]

cytosol

Displaying **all 3** entries
GO Term	Evidence Code	PMID
zinc ion binding
L-ribulose-phosphate 4-epimerase activity
aldehyde-lyase activity

GO Hierarchy

molecular function

catalytic activity [inference]

lyase activity [inference]

carbon-carbon lyase activity [inference]

aldehyde-lyase activity

isomerase activity [inference]

racemase and epimerase activity [inference]

racemase and epimerase activity, acting on carbohydrates and derivatives [inference]

L-ribulose-phosphate 4-epimerase activity

binding [inference]

ion binding [inference]

cation binding [inference]

metal ion binding [inference]

transition metal ion binding [inference]

zinc ion binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Bacteria

Group Name

L-ribulose-5-phosphate 4-epimerase

Functional Category

C: Energy production and conversion
E: Amino acid transport and metabolism
T: Signal transduction mechanisms

Displaying **all 2** entries
Gene Ontology
catalytic activity
pentose catabolic process

Displaying **all 2** entries
InterPro
Class II aldolase/adducin N-terminal domain superfamily
Class II aldolase/adducin N-terminal

International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements