Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
Resources Genes Glycoproteins Lectins Glycolipids Glycans Pathways Diseases Organisms
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Other Information
Release Statistics Download
Tools
SugarDrawer GlycanBuilder Glycan Converters GlycoMaple GlycomeAtlas LM-GlycomeAtlas GALAXY MCAW GlycoSim GRable
Search Tools
Cross Search Glycan Search Publication Search Programmatic Access
Standards Ontologies Notations
Guidelines
MIRAGE
conserved protein with laccase domain

Summary
Gene Symbol
  • ylmD
Organism
Bacillus subtilis subsp. subtilis str. 168
NCBI Gene
939954
PubChem
939954
Annotation
Keyword
  • Copper
  • Hydrolase
  • Metal-binding
  • Oxidoreductase
  • Reference proteome
  • Transferase
  • Zinc
Proteins
Displaying all 2 entries
UniProt Protein Name
O31726
  • Adenosine deaminase YlmD
  • S-methyl-5'-thioadenosine phosphorylase YlmD
A0A6M4JHX9
Annotation information from UniProt.
Gene Ontology (GO)
Gene Ontology information from NCBI Gene and UniProt.
OrthoDB (Group)
Group level
Bacteria
Group Name
Multi-copper polyphenol oxidoreductase
Functional Category
  • L: Replication, recombination and repair
  • P: Inorganic ion transport and metabolism
  • T: Signal transduction mechanisms
Displaying all 8 entries
Gene Ontology
2'-deoxyadenosine deaminase activity
S-methyl-5-thioadenosine phosphorylase activity
adenosine deaminase activity
copper ion binding
hydrolase activity
metal ion binding
purine-nucleoside phosphorylase activity
transferase activity
Displaying all 3 entries
InterPro
Cytotoxic necrotizing factor-like, catalytic
Multi-copper polyphenol oxidoreductase superfamily
Multi-copper polyphenol oxidoreductase
Rhea

RHEA:13233

guanosine + phosphate
guanine + α-D-ribose 1-phosphate
Enzyme
PMID

RHEA:27738

2'-deoxyguanosine + phosphate
guanine + 2-deoxy-α-D-ribose 1-phosphate
Enzyme
PMID

RHEA:27642

adenosine + phosphate
adenine + α-D-ribose 1-phosphate
Enzyme
PMID

RHEA:27638

xanthosine + phosphate
xanthine + α-D-ribose 1-phosphate
Enzyme
PMID

RHEA:27750

2'-deoxyinosine + phosphate
hypoxanthine + 2-deoxy-α-D-ribose 1-phosphate
Enzyme
PMID

RHEA:19805

a purine D-ribonucleoside + phosphate
a purine nucleobase + α-D-ribose 1-phosphate
Enzyme
PMID

RHEA:27742

2'-deoxyadenosine + phosphate
adenine + 2-deoxy-α-D-ribose 1-phosphate
Enzyme
PMID

RHEA:24408

H2O + H+ + adenosine
inosine + NH4+
Enzyme
PMID

RHEA:24869

5'-deoxyadenosine + phosphate
adenine + 5-deoxy-α-D-ribose 1-phosphate
Enzyme
PMID

RHEA:28190

H2O + H+ + 2'-deoxyadenosine
NH4+ + 2'-deoxyinosine
Enzyme
PMID

RHEA:36431

a purine 2'-deoxy-D-ribonucleoside + phosphate
a purine nucleobase + 2-deoxy-α-D-ribose 1-phosphate
Enzyme
PMID

RHEA:27646

inosine + phosphate
hypoxanthine + α-D-ribose 1-phosphate
Enzyme
PMID

RHEA:11852

S-methyl-5'-thioadenosine + phosphate
adenine + S-methyl-5-thio-α-D-ribose 1-phosphate
Enzyme
PMID
About Release Notes Help Feedback
International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

Logo License Policies Site Map

Contact: support@glycosmos.org

This work is licensed under Creative Commons Attribution 4.0 International

GlyCosmos Portal v4.2.1

Last updated: April 7, 2025