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Glycan Structure Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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G40702WU
Summary
- GlyTouCan ID
-
G40702WU
- IUPAC Condensed
- Man(a1-2)Man(a1-2)Man(a1-3)[Man(a1-3)[Man(a1-2)Man(a1-6)]Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc(b1-
- Motifs
- N-Glycan high mannose
- Subsumption Level
- Fully-defined saccharide
- Monoisotopic Mass
- 1720.59
3D Structures
G48369JO
G55786MG
Organisms
| Organisms | Evidence |
|---|---|
| Galliformes (landfowls) | |
| Tetronarce californica (Pacific electric ray) | |
| Mus musculus (house mouse) | |
| Cavia porcellus (domestic guinea pig) | |
| Phaseolus vulgaris |
Taxonomic Hierarchy
GlycoGene Database (GGDB)
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| UGGT1 (UGCGL1) | UDP-Glc |
G40702WU
|
MTX |
G81356NS
|
MTX |
| Gene Symbol | Donor | Acceptor | Reducing terminal(Acceptor) | Product | Reducing terminal(Product) | Reference |
|---|---|---|---|---|---|---|
| UGGT1 (UGCGL1) | UDP-Glc |
G40702WU
|
MTX |
G81356NS
|
MTX |
KEGG BRITE Database
G55220VL
G60230HH
G97455PT
GALAXY
Glucose Units
- ODS
- 4.9
- Amide
- 9
Core Protein
| UniProt ID | Protein Name | Reference | Source |
|---|---|---|---|
| P24627 | Lactotransferrin | ||
| P26334 | Variant surface glycoprotein MITAT 1.6 | ||
| P26792 | Beta-fructofuranosidase, insoluble isoenzyme 1 | ||
| P35253 | Envelope glycoprotein | ||
| P56526 | Alpha-glucosidase | ||
| P61823 | Ribonuclease pancreatic | ||
| P83180 | Hemocyanin B chain |
Sequence Descriptors
- GlycoCT
-
RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:a-dman-HEX-1:5 8b:a-dman-HEX-1:5 9b:a-dman-HEX-1:5 10b:a-dman-HEX-1:5 11b:a-dman-HEX-1:5 12b:a-dman-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7o(2+1)8d 8:5o(6+1)9d 9:9o(3+1)10d 10:9o(6+1)11d 11:11o(2+1)12d
- WURCS
- WURCS=2.0/3,10,9/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3-3-3-3-3-3/a4-b1_b4-c1_c3-d1_c6-g1_d2-e1_e2-f1_g3-h1_g6-i1_i2-j1
Literature
| PubMed ID | Title | First Author | Publication Date | Source |
|---|---|---|---|---|
| 33737529 | Toward robust N-glycomics of various tissue samples that may contain glycans with unknown or unexpected structures | Suzuki Noriko | 2021-03-18 |
|
| 34834161 | Glycan Profile Analysis of Engineered Trastuzumab with Rationally Added Glycosylation Sequons Presents Significantly Increased Glycan Complexity | Cruz E | 2021 Oct 20 |
|
| 32879488 | Shared structural mechanisms of general anaesthetics and benzodiazepines | Kim JJ | 2020 Sep 02 |
|
| 31097697 | Kappa chain maturation helps drive rapid development of an infant HIV-1 broadly neutralizing antibody lineage | Simonich CA | 2019 May 16 |
|
| 19270371 | Strategic Glycan Elution Map for the Production of Human-TypeN-Linked Oligosaccharides: The Case of Hen Egg Yolk and White | SUMIYOSHI W | 2009 Mar 23 |
|
| 12110688 | Structures of the Complexes of a Potent Anti-HIV Protein Cyanovirin-N and High Mannose Oligosaccharides | Botos I | 2002 Sep 13 |
|
| 11469797 | The widespread effect of beta 1,4-galactosyltransferase on N-glycan processing | Fukuta K | 2001 Aug 01 |
|
| 10988252 | Characterization of the carbohydrate chains of the secreted form of the human epidermal growth factor receptor | Stroop CJ | 2000 Sep |
|
| 10929010 | N-glycan patterns of human transferrin produced in Trichoplusia ni insect cells: effects of mammalian galactosyltransferase | Ailor E | 2000 Aug |
|
| 9952469 | Characterization of N-Glycans from Arabidopsis. Application to a Fucose-Deficient Mutant1 | Rayon C | 1999 Feb 01 |
|
