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G55220VL

Summary

GlyTouCan ID: G55220VL
IUPAC Condensed: Man(a1-3)[Man(a1-3)[Man(a1-6)]Man(a1-6)]Man(b1-4)GlcNAc(b1-4)GlcNAc(b1-
Motifs: N-Glycan high mannose
Subsumption Level: Fully-defined saccharide
Monoisotopic Mass: 1234.43

External Links

BCSDB

126005

GlyConnect structure

10773
1443

GlyGen

G55220VL

GlycoChemExplorer

JCGG-M0000003018

JCGGDB AIST

JCGG-STR014426

KEGG GLYCAN

G00012

UniCarbKB

7666

ChEBI

71514

PubChem Compound

70698382

PubChem Substance

252296300

3D Structures

GlycoNAVI: G55220VL
GLYCAM: DManpa1-3[DManpa1-3[DManpa1-6]DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-OH

Organisms

Displaying entries **1 - 5** of 12 in total

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Organisms	Evidence
Mus musculus (house mouse)	GlyConnectStructure
Sus scrofa (pig)	GlyTouCan(glycome-db)
Homo sapiens (human)	GlyConnectStructure GlyConnectStructure GlyGen(UniCarbKB) GlyTouCan(glycome-db)
Rattus norvegicus (Norway rat)	GlyConnectStructure GlyGen(UniCarbKB)
Viruses	GlyTouCan(glycome-db)

Taxonomic Hierarchy

root

cellular organisms [inference]

Eukaryota (eucaryotes) [inference]

Opisthokonta [inference]

Metazoa (metazoans) [inference]

Eumetazoa [inference]

Bilateria [inference]

Deuterostomia [inference]

Chordata (chordates) [inference]

Craniata [inference]

Vertebrata (vertebrates) [inference]

Gnathostomata (jawed vertebrates) [inference]

Teleostomi [inference]

Euteleostomi (bony vertebrates) [inference]

Sarcopterygii [inference]

Dipnotetrapodomorpha [inference]

Tetrapoda (tetrapods) [inference]

Amniota (amniotes) [inference]

Mammalia (mammals) [inference]

Theria [inference]

Eutheria (placentals) [inference]

Boreoeutheria [inference]

Euarchontoglires [inference]

Glires (Rodents and rabbits) [inference]

Rodentia (rodent) [inference]

Hystricomorpha (guinea pigs and others) [inference]

Caviidae (cavies) [inference]

Cavia (guinea pigs) [inference]

Cavia porcellus (domestic guinea pig)

Myomorpha (mice and others) [inference]

Muroidea [inference]

Cricetidae [inference]

Cricetinae (hamsters)

Cricetulus [inference]

Cricetulus griseus (Chinese hamster)

Muridae [inference]

Murinae [inference]

Mus (mice) [inference]

Mus [inference]

Mus musculus (house mouse)

Rattus [inference]

Rattus norvegicus (Norway rat)

Primates [inference]

Haplorrhini [inference]

Simiiformes [inference]

Catarrhini [inference]

Hominoidea (apes) [inference]

Hominidae (great apes) [inference]

Homininae [inference]

Homo [inference]

Homo sapiens (human)

Laurasiatheria [inference]

Artiodactyla (even-toed ungulates & whales) [inference]

Suina [inference]

Suidae (pigs) [inference]

Sus [inference]

Sus scrofa (pig)

Ruminantia [inference]

Pecora [inference]

Bovidae [inference]

Bovinae [inference]

Bos (cattle) [inference]

Bos taurus (domestic cattle)

Sauropsida (sauropsids) [inference]

Sauria (diapsids) [inference]

Archelosauria [inference]

Archosauria [inference]

Dinosauria [inference]

Saurischia [inference]

Theropoda [inference]

Coelurosauria [inference]

Aves (birds) [inference]

Neognathae [inference]

Galloanserae [inference]

Galliformes (landfowls) [inference]

Phasianidae (turkeys) [inference]

Phasianinae [inference]

Gallus [inference]

Gallus gallus (chicken)

Protostomia [inference]

Ecdysozoa [inference]

Panarthropoda [inference]

Arthropoda (arthropods) [inference]

Mandibulata [inference]

Pancrustacea [inference]

Hexapoda (hexapods) [inference]

Insecta (insects) [inference]

Dicondylia [inference]

Pterygota (winged insects) [inference]

Neoptera [inference]

Endopterygota [inference]

Diptera (flies) [inference]

Brachycera [inference]

Muscomorpha [inference]

Eremoneura [inference]

Cyclorrhapha [inference]

Schizophora [inference]

Acalyptratae [inference]

Ephydroidea [inference]

Drosophilidae (pomace flies) [inference]

Drosophilinae [inference]

Drosophilini [inference]

Drosophila (fruit flies) [inference]

Sophophora [inference]

melanogaster group [inference]

melanogaster subgroup [inference]

Drosophila melanogaster (fruit fly)

Bacteria (eubacteria) [inference]

Pseudomonadota [inference]

Gammaproteobacteria [inference]

Enterobacterales [inference]

Enterobacteriaceae [inference]

Escherichia [inference]

Escherichia coli

Viruses

GlycoGene Database (GGDB)

Displaying 1 entry
Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
MGAT1	UDP-GlcNAc	G55220VL	Asn-X	G08520NM	Asn-X	1827260

Displaying 1 entry
Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Product	Reducing terminal(Product)	Reference
MGAT1	UDP-GlcNAc	G55220VL	Asn-X	G08520NM	Asn-X	1827260

Displaying 1 entry
Gene Symbol	Donor	Acceptor	Reducing terminal(Acceptor)	Reference
POMGNT1	UDP-GlcNAc	G55220VL	pylidyramine	11709191

KEGG BRITE Database

KEGG ID

G00012

Enzyme

References

Reactions

Displaying **all 2** entries
KEGG Reaction	Enzyme	Acceptor	Product
R05983	2.4.1.101	G55220VL	G08520NM
R12479	3.2.1.113	G40702WU	G55220VL

GALAXY

Glucose Units

ODS: 7.1999998092651367188
Amide: 6.1999998092651367188

Degrading Enzymes

Displaying **all 5** entries
Enzyme	Substrate	Product
β-HexNAcase	G08520NM	G55220VL
β-Xylosidase	G14390SN	G55220VL
β-HexNAcase	G20966TZ	G55220VL
α-Fucosidase	G51175PR	G55220VL
β-HexNAcase	G56748EO	G55220VL

Glycans containing this structure in GALAXY

G11637WL

G56748EO

G34499SX

G59942FB

G80966KZ

G19958IL

G13598WY

G63337SS

G20966TZ

G82942ZJ

G50730KL

G24657IT

G14390SN

G40702WU

G16828VN

G91704UR

G51175PR

G68668TB

G60230HH

G83161QT

G08520NM

GALAXY: Glycoanalysis by the three axes of MS and chromatography.

Core Protein

Displaying entries **11 - 20** of **131** in total

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UniProt ID	Protein Name	Reference	Source
O18330	Major royal jelly protein 1	7766191	GlyConnect
O24103	S3 ribonuclease (Fragment)	8922956	GlyConnect
O35112	CD166 antigen	24090084	GlyGen
O35795	Ectonucleoside triphosphate diphosphohydrolase 2	24090084	GlyGen
O70352	CD82 antigen	24090084	GlyGen
O75015	Low affinity immunoglobulin gamma Fc region receptor III-B	25345863	GlyGen GlyConnect
O88871	Gamma-aminobutyric acid type B receptor subunit 2	24090084	GlyGen
P00533	Epidermal growth factor receptor	10988252	GlyGen GlyConnect
P00747	Plasminogen	1899031 2059624 2065054 2386787	GlyGen GlyConnect
P00750	Tissue-type plasminogen activator	2513186 2514791	GlyGen GlyConnect

Sequence Descriptors

GlycoCT

RES
1b:b-dglc-HEX-1:5
2s:n-acetyl
3b:b-dglc-HEX-1:5
4s:n-acetyl
5b:b-dman-HEX-1:5
6b:a-dman-HEX-1:5
7b:a-dman-HEX-1:5
8b:a-dman-HEX-1:5
9b:a-dman-HEX-1:5
LIN
1:1d(2+1)2n
2:1o(4+1)3d
3:3d(2+1)4n
4:3o(4+1)5d
5:5o(3+1)6d
6:5o(6+1)7d
7:7o(3+1)8d
8:7o(6+1)9d

WURCS

WURCS=2.0/3,7,6/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3-3-3/a4-b1_b4-c1_c3-d1_c6-e1_e3-f1_e6-g1

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

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