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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | November 21, 2024 |
| PDB ID | UniProt ID | Title | Descriptor ▲ |
|---|---|---|---|
| 7KDI | P0DTC2 | SARS-CoV-2 D614G 3 RBD down Spike Protein Trimer fully cleaved by furin without the P986-P987 stabilizing mutations (S-RRAR-D614G) | Spike glycoprotein |
| 7KDJ | P0DTC2 | SARS-CoV-2 D614G 1-RBD-up Spike Protein Trimer fully cleaved by furin without the P986-P987 stabilizing mutations (S-RRAR-D614G) | Spike glycoprotein |
| 7KDL | P0DTC2 | SARS-CoV-2 D614G 1-RBD up Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-D614G) | Spike glycoprotein |
| 7KEC | P0DTC2 | SARS-CoV-2 D614G 1-RBD-up Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-D614G Sub-Classification) | Spike glycoprotein |
| 7KJ3 | P0DTC2 | SARS-CoV-2 Spike Glycoprotein with two ACE2 Bound | Spike glycoprotein |
| 7KJ3 | Q9BYF1 | SARS-CoV-2 Spike Glycoprotein with two ACE2 Bound | Spike glycoprotein |
| 7LWS | P0DTC2 | UK (B.1.1.7) SARS-CoV-2 S-GSAS-D614G variant spike protein in the 3-RBD-down conformation | Spike glycoprotein |
| 7A92 | P0DTC2 | Dissociated S1 domain of SARS-CoV-2 Spike bound to ACE2 (Unmasked Refinement) | Spike glycoprotein |
| 7A92 | Q9BYF1 | Dissociated S1 domain of SARS-CoV-2 Spike bound to ACE2 (Unmasked Refinement) | Spike glycoprotein |
| 7CYC | P15423 | Cryo-EM structures of Alphacoronavirus spike glycoprotein | Spike glycoprotein |
| 7KE4 | P0DTC2 | SARS-CoV-2 D614G 3 RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-D614G Sub-class) | Spike glycoprotein |
| 7KE6 | P0DTC2 | SARS-CoV-2 D614G 3 RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-D614G sub-classification) | Spike glycoprotein |
| 7KE9 | P0DTC2 | SARS-CoV-2 D614G 1-RBD-up Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-D614G sub-classification) | Spike glycoprotein |
| 7M5E | A0A140AYW5 | MERS-CoV S bound to the broadly neutralizing B6 Fab fragment (C3 refinement) | Spike glycoprotein |
| 7MJG | P0DTC2 | Cryo-EM structure of the SARS-CoV-2 N501Y mutant spike protein ectodomain | Spike glycoprotein |
| 4H14 | Q1HLC5 | Crystal Structure of Bovine Coronavirus Spike Protein Lectin Domain | Spike glycoprotein |
| 4ZPW | K9N5Q8 | Structure of unbound MERS-CoV spike receptor-binding domain (England1 strain). | Spike glycoprotein |
| 5GNB | Q5MQD0 | Crystal Structure of the Receptor Binding Domain of the Spike Glycoprotein of Human Betacoronavirus HKU1 (HKU1 1A-CTD, 2.3 angstrom, native-SAD phasing) | Spike glycoprotein |
| 5GYQ | A3EXG6 | Putative receptor-binding domain of bat-derived coronavirus HKU9 spike protein | Spike glycoprotein |
| 6XF6 | P0DTC2 | Cryo-EM structure of a biotinylated SARS-CoV-2 spike probe in the prefusion state (1 RBD up) | Spike glycoprotein |
| 7A91 | P0DTC2 | Dissociated S1 domain of SARS-CoV-2 Spike bound to ACE2 (Non-Uniform Refinement) | Spike glycoprotein |
| 7A91 | Q9BYF1 | Dissociated S1 domain of SARS-CoV-2 Spike bound to ACE2 (Non-Uniform Refinement) | Spike glycoprotein |
| 7JJI | P0DTC2 | Structure of SARS-CoV-2 3Q-2P full-length prefusion spike trimer (C3 symmetry) | Spike glycoprotein |
| 7KIP | Q6Q1S2 | A 3.4 Angstrom cryo-EM structure of the human coronavirus spike trimer computationally derived from vitrified NL63 virus particles | Spike glycoprotein |
| 7KJ5 | P0DTC2 | SARS-CoV-2 Spike Glycoprotein, prefusion with one RBD up conformation | Spike glycoprotein |
| 7M8K | P0DTC2 | Cryo-EM structure of Brazil (P.1) SARS-CoV-2 spike glycoprotein variant in the prefusion state (1 RBD up) | Spike glycoprotein |
| 7KEA | P0DTC2 | SARS-CoV-2 D614G 1-RBD-up Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-D614G sub classification) | Spike glycoprotein |
| 7KEW | A0A510C2V9 | Bundibugyo virus GP (mucin deleted) bound to antibody Fab BDBV-43 | Spike glycoprotein 1, BDBV-43 Fab heavy chain, BDBV-43 Fab light chain, Envelope glycoprotein 2 |
| 7KEW | B8XCN0 | Bundibugyo virus GP (mucin deleted) bound to antibody Fab BDBV-43 | Spike glycoprotein 1, BDBV-43 Fab heavy chain, BDBV-43 Fab light chain, Envelope glycoprotein 2 |
| 7KEW | 7KEW | Bundibugyo virus GP (mucin deleted) bound to antibody Fab BDBV-43 | Spike glycoprotein 1, BDBV-43 Fab heavy chain, BDBV-43 Fab light chain, Envelope glycoprotein 2 |
| 7AKD | P0DTC2 | Structure of the SARS-CoV-2 spike glycoprotein in complex with the 47D11 neutralizing antibody Fab fragment | Spike glycoprotein, 47D11 neutralizing antibody heavy chain, 47D11 neutralizing antibody light chain |
| 7AKD | 7AKD | Structure of the SARS-CoV-2 spike glycoprotein in complex with the 47D11 neutralizing antibody Fab fragment | Spike glycoprotein, 47D11 neutralizing antibody heavy chain, 47D11 neutralizing antibody light chain |
| 7AKJ | Q5DIC5 | Structure of the SARS-CoV spike glycoprotein in complex with the 47D11 neutralizing antibody Fab fragment | Spike glycoprotein, 47D11 neutralizing antibody heavy chain, 47D11 neutralizing antibody light chain |
| 7AKJ | 7AKJ | Structure of the SARS-CoV spike glycoprotein in complex with the 47D11 neutralizing antibody Fab fragment | Spike glycoprotein, 47D11 neutralizing antibody heavy chain, 47D11 neutralizing antibody light chain |
| 7BYR | P0DTC2 | BD23-Fab in complex with the S ectodomain trimer | Spike glycoprotein, Ab23-Fab-Heavy Chain, Ab23-Fab-Light Chain |
| 7BYR | 7BYR | BD23-Fab in complex with the S ectodomain trimer | Spike glycoprotein, Ab23-Fab-Heavy Chain, Ab23-Fab-Light Chain |
| 7M7B | P0DTC2 | SARS-CoV-2 Spike:Fab 3D11 complex focused refinement | Spike glycoprotein, Antibody Fab 3D11 heavy chain, Antibody Fab 3D11 light chain |
| 7M7B | 7M7B | SARS-CoV-2 Spike:Fab 3D11 complex focused refinement | Spike glycoprotein, Antibody Fab 3D11 heavy chain, Antibody Fab 3D11 light chain |
| 7CHH | P0DTC2 | Cryo-EM structure of the SARS-CoV-2 S-6P in complex with BD-368-2 Fabs | Spike glycoprotein, BD-368-2 Fab heavy chain, BD-368-2 Fab light chain |
| 7CHH | 7CHH | Cryo-EM structure of the SARS-CoV-2 S-6P in complex with BD-368-2 Fabs | Spike glycoprotein, BD-368-2 Fab heavy chain, BD-368-2 Fab light chain |
| 7M6F | P0DTC2 | Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG1-22 | Spike glycoprotein, BG1-22 Fab Heavy Chain, BG1-22 Fab Light Chain |
| 7M6F | 7M6F | Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG1-22 | Spike glycoprotein, BG1-22 Fab Heavy Chain, BG1-22 Fab Light Chain |
| 7M6I | P0DTC2 | Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, BG1-24 | Spike glycoprotein, BG1-24 Fab Light Chain, BG1-24 Fab Heavy Chain |
| 7M6I | 7M6I | Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, BG1-24 | Spike glycoprotein, BG1-24 Fab Light Chain, BG1-24 Fab Heavy Chain |
| 7M6E | P0DTC2 | Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG10-19 | Spike glycoprotein, BG10-19 Fab Heavy Chain, BG10-19 Fab Light Chain |
| 7M6E | 7M6E | Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG10-19 | Spike glycoprotein, BG10-19 Fab Heavy Chain, BG10-19 Fab Light Chain |
| 7M6G | P0DTC2 | Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG7-15 | Spike glycoprotein, BG7-15 Fab Heavy Chain, BG7-15 Fab Light Chain |
| 7M6G | 7M6G | Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG7-15 | Spike glycoprotein, BG7-15 Fab Heavy Chain, BG7-15 Fab Light Chain |
| 7M6H | P0DTC2 | Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, BG7-20 | Spike glycoprotein, BG7-20 Fab Heavy Chain, BG7-20 Fab Light Chain |
| 7M6H | 7M6H | Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, BG7-20 | Spike glycoprotein, BG7-20 Fab Heavy Chain, BG7-20 Fab Light Chain |
