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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | November 21, 2024 |
| PDB ID | UniProt ID | Title | Descriptor ▼ |
|---|---|---|---|
| 1ABR | P11140 | CRYSTAL STRUCTURE OF ABRIN-A | ABRIN-A COMPLEXED WITH TWO SUGAR CHAINS |
| 6QEE | 6QEE | Nanodisc reconstituted Human-mouse chimeric ABCB1 (ABCB1HM)-EQ mutant in complex with UIC2 Fab and Zosuquidar. | ABCB1HM-EQ, UIC2 Antigen Binding Fragment Light chain, UIC2 Antigen Binding Fragment Heavy Chain |
| 3KSM | Q2S7D2 | Crystal structure of ABC-type sugar transport system, periplasmic component from Hahella chejuensis | ABC-type sugar transport system, periplasmic component |
| 4R73 | A3N294 | Structure of the periplasmic binding protein AfuA from Actinobacillus pleuropneumoniae (endogenous glucose-6-phosphate and mannose-6-phosphate bound) | ABC-type Fe3+ transport system, periplasmic component |
| 4R74 | A3N294 | Structure of the periplasmic binding protein AfuA from Actinobacillus pleuropneumoniae (exogenous fructose-6-phosphate bound) | ABC-type Fe3+ transport system, periplasmic component |
| 4R75 | A3N294 | Structure of the periplasmic binding protein AfuA from Actinobacillus pleuropneumoniae (exogenous sedoheptulose-7-phosphate bound) | ABC-type Fe3+ transport system, periplasmic component |
| 4RS3 | A0QYB3 | Crystal structure of carbohydrate transporter A0QYB3 from Mycobacterium smegmatis str. MC2 155, target EFI-510969, in complex with xylitol | ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, periplasmic sugar-binding protein (E.C.3.6.3.17) |
| 6TFQ | O50271 | Structure in P3212 form of the PBP/SBP MoaA in complex with mannopinic acid from A.tumefacien R10 | ABC transporter substrate-binding protein |
| 6LCE | A0A0A1GL90 | Crystal Structure of beta-L-arabinobiose binding protein - selenomethionine derivative | ABC transporter substrate binding component |
| 4G68 | 4G68 | Biochemical and structural insights into xylan utilization by the thermophilic bacteriumcaldanaerobius polysaccharolyticus | ABC transporter |
| 4WWH | A0QT42 | CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM MYCOBACTERIUM SMEGMATIS (MSMEG_1704, TARGET EFI-510967) WITH BOUND D-GALACTOSE | ABC TRANSPORTER SOLUTE BINDING PROTEIN |
| 4WZZ | A9KIX1 | CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM CLOSTRIDIUM PHYTOFERMENTAS (Cphy_0583, TARGET EFI-511148) WITH BOUND L-RHAMNOSE | ABC TRANSPORTER SOLUTE BINDING PROTEIN |
| 4Y9T | B9K0Q5 | CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM AGROBACTERIUM VITIS S4 (Avi_5305, TARGET EFI-511224) WITH BOUND ALPHA-D-GLUCOSAMINE | ABC TRANSPORTER SOLUTE BINDING PROTEIN |
| 4YS6 | A9KQP6 | CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM CLOSTRIDIUM PHYTOFERMENTANS (Cphy_1585, TARGET EFI-511156) WITH BOUND BETA-D-GLUCOSE | ABC TRANSPORTER SOLUTE BINDING PROTEIN |
| 6MPG | Q2N0S6 | Cryo-EM structure at 3.2 A resolution of HIV-1 fusion peptide-directed antibody, A12V163-b.01, elicited by vaccination of Rhesus macaques, in complex with stabilized HIV-1 Env BG505 DS-SOSIP, which was also bound to antibodies VRC03 and PGT122 | A12V163-b.01 Light Chain, Envelope glycoprotein gp41, Envelope glycoprotein gp120, A12V163-b.01 Heavy Chain, PGT122 Heavy chain, PGT122 Light chain, VRC03 heavy chain, VRC03 Light chain |
| 6MPG | 6MPG | Cryo-EM structure at 3.2 A resolution of HIV-1 fusion peptide-directed antibody, A12V163-b.01, elicited by vaccination of Rhesus macaques, in complex with stabilized HIV-1 Env BG505 DS-SOSIP, which was also bound to antibodies VRC03 and PGT122 | A12V163-b.01 Light Chain, Envelope glycoprotein gp41, Envelope glycoprotein gp120, A12V163-b.01 Heavy Chain, PGT122 Heavy chain, PGT122 Light chain, VRC03 heavy chain, VRC03 Light chain |
| 6MPG | Q2N0S7 | Cryo-EM structure at 3.2 A resolution of HIV-1 fusion peptide-directed antibody, A12V163-b.01, elicited by vaccination of Rhesus macaques, in complex with stabilized HIV-1 Env BG505 DS-SOSIP, which was also bound to antibodies VRC03 and PGT122 | A12V163-b.01 Light Chain, Envelope glycoprotein gp41, Envelope glycoprotein gp120, A12V163-b.01 Heavy Chain, PGT122 Heavy chain, PGT122 Light chain, VRC03 heavy chain, VRC03 Light chain |
| 6MSS | 6MSS | Diversity in the type II Natural Killer T cell receptor repertoire and antigen specificity leads to differing CD1d docking strategies | A11B8.2 NKT TCR alpha-chain, A11B8.2 NKT TCR beta-chain, Antigen-presenting glycoprotein CD1d1, Beta-2-microglobulin |
| 6MSS | P11609 | Diversity in the type II Natural Killer T cell receptor repertoire and antigen specificity leads to differing CD1d docking strategies | A11B8.2 NKT TCR alpha-chain, A11B8.2 NKT TCR beta-chain, Antigen-presenting glycoprotein CD1d1, Beta-2-microglobulin |
| 6MSS | P01887 | Diversity in the type II Natural Killer T cell receptor repertoire and antigen specificity leads to differing CD1d docking strategies | A11B8.2 NKT TCR alpha-chain, A11B8.2 NKT TCR beta-chain, Antigen-presenting glycoprotein CD1d1, Beta-2-microglobulin |
| 5CD5 | 5CD5 | Crystal structure of an immature VRC01-class antibody DRVIA7 from a Chinese donor bound to clade A/E HIV-1 gp120 core | 93TH057 HIV-1 gp120 core, DRVIA7 Fab Heavy Chain, DRVIA7 Fab Light Chain |
| 2G5B | Q58EU4 | Crystal Structure of the anti-Bax monoclonal antibody 6A7 and a Bax peptide. | 6A7 Fab Light Chain, 6A7 Fab Heavy Chain, Bax Peptide |
| 2G5B | P84751 | Crystal Structure of the anti-Bax monoclonal antibody 6A7 and a Bax peptide. | 6A7 Fab Light Chain, 6A7 Fab Heavy Chain, Bax Peptide |
| 2G5B | 2G5B | Crystal Structure of the anti-Bax monoclonal antibody 6A7 and a Bax peptide. | 6A7 Fab Light Chain, 6A7 Fab Heavy Chain, Bax Peptide |
| 5DUM | Q1WDM0 | Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody 65C6 | 65C6 Heavy Chain, 65C6 Light Chain, Hemagglutinin |
| 5DUM | 5DUM | Crystal structure of influenza A virus H5 hemagglutinin globular head in complex with the Fab of antibody 65C6 | 65C6 Heavy Chain, 65C6 Light Chain, Hemagglutinin |
| 6ETJ | Q16875 | HUMAN PFKFB3 IN COMPLEX WITH KAN0438241 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 (E.C.2.7.1.105,3.1.3.46) |
| 4MA4 | Q16875 | S-glutathionylated PFKFB3 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 (E.C.2.7.1.105, 3.1.3.46) |
| 3QOM | Q88ZA9 | Crystal structure of 6-phospho-beta-glucosidase from Lactobacillus plantarum | 6-phospho-beta-glucosidase (E.C.3.2.1.86) |
| 5IWL | 5IWL | CD47-diabody complex | 5F9 diabody, Leukocyte surface antigen CD47 |
| 5IWL | Q08722 | CD47-diabody complex | 5F9 diabody, Leukocyte surface antigen CD47 |
| 6BE1 | E9QLC0 | Cryo-EM structure of serotonin receptor | 5-hydroxytryptamine receptor 3A |
| 6W1J | Q8K1F4 | Cryo-EM structure of 5HT3A receptor in presence of Alosetron | 5-hydroxytryptamine receptor 3A |
| 6DG7 | E9QLC0 | Full-length 5-HT3A receptor in a serotonin-bound conformation- State 1 | 5-hydroxytryptamine receptor 3A |
| 6DG8 | E9QLC0 | Full-length 5-HT3A receptor in a serotonin-bound conformation- State 2 | 5-hydroxytryptamine receptor 3A |
| 6NP0 | E9QLC0 | Cryo-EM structure of 5HT3A receptor in presence of granisetron | 5-hydroxytryptamine receptor 3A |
| 6W1Y | Q8K1F4 | Cryo-EM structure of 5HT3A receptor in presence of Palonosetron | 5-hydroxytryptamine receptor 3A |
| 6W1M | Q8K1F4 | Cryo-EM structure of 5HT3A receptor in presence of Ondansetron | 5-hydroxytryptamine receptor 3A |
| 5M8M | P17643 | Crystal structure of human tyrosinase related protein 1 in complex with kojic acid | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8N | P17643 | Crystal structure of human tyrosinase related protein 1 in complex with mimosine | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8O | P17643 | Crystal structure of human tyrosinase related protein 1 in complex with tropolone | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8Q | P17643 | Crystal structure of human tyrosinase related protein 1 mutant (T391V-R374S-Y362F) in complex with kojic acid | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8R | P17643 | Crystal structure of human tyrosinase related protein 1 (T391V-R374S-Y362F) in complex with mimosine | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8S | P17643 | Crystal structure of human tyrosinase related protein 1 mutant (T391V-R374S-Y362F) in complex with phenylthiourea (PTU) | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8T | P17643 | Crystal structure of human tyrosinase related protein 1 (T391V-R374S-Y362F) in complex with tropolone | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 6HXW | P21589 | structure of human CD73 in complex with antibody IPH53 | 5'-nucleotidase (E.C.3.1.3.5), IPH53 heavy chain, IPH53 light chain |
| 6HXW | 6HXW | structure of human CD73 in complex with antibody IPH53 | 5'-nucleotidase (E.C.3.1.3.5), IPH53 heavy chain, IPH53 light chain |
| 4H1S | P21589 | Crystal Structure of a Truncated Soluble form of Human CD73 with Ecto-5'-Nucleotidase activity | 5'-nucleotidase (E.C.3.1.3.5) |
| 6GSZ | I0AZ41 | Crystal structure of native alfa-L-rhamnosidase from Aspergillus terreus | 5'(3')-deoxyribonucleotidase, cytosolic type (E.C.3.1.3.-) |
| 6I1A | A0A254TQT9 | Crystal structure of rutinosidase from Aspergillus niger | 5'(3')-deoxyribonucleotidase, cytosolic type (E.C.3.1.3.-) |
