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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | November 21, 2024 |
| PDB ID | UniProt ID ▼ | Title | Descriptor |
|---|---|---|---|
| 7TFO | Q2N0S6 | Cryo-EM structure of HIV-1 Env trimer BG505 SOSIP.664 in complex with CD4bs antibody Ab1573 | |
| 8DP1 | Q2N0S6 | Cryo-EM structure of HIV-1 Env(BG505.T332N SOSIP) in complex with DH1030.1 Fab | |
| 8VFV | Q2N0S6 | HIV Env BG505_MD39_B16 SOSIP boosting trimer in complex with B16_d77.5 mouse Fab and RM20A3 Fab | |
| 8TOX | Q2N0S6 | Cryo-EM structure of BG505 Env mutant A517E in complex with antibody ACS202 Fab | |
| 8FYJ | Q2N0S6 | Structure of HIV-1 BG505 SOSIP-HT2 in complex with two CD4 molecules (class I) | |
| 6X97 | Q2N0S6 | Cryo-EM model of HIV-1 Env BG505 SOSIP.664 in complex with rabbit monoclonal antibody 11A fragment antigen binding variable domain | |
| 6X98 | Q2N0S6 | Cryo-EM model of HIV-1 Env BG505 SOSIP.664 in complex with rabbit monoclonal antibody 11B fragment antigen binding variable domain | |
| 8FR6 | Q2N0S6 | Antibody vFP53.02 in complex with HIV-1 envelope trimer BG505 DS-SOSIP | |
| 8G85 | Q2N0S6 | vFP52.02 Fab in complex with BG505 DS-SOSIP Env trimer | |
| 8G9W | Q2N0S6 | Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 1) | |
| 8G9X | Q2N0S6 | Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 2) | |
| 8G9Y | Q2N0S6 | Cryo-EM structure of vFP49.02 Fab in complex with HIV-1 Env BG505 DS-SOSIP.664 (conformation 3) | |
| 8GAS | Q2N0S6 | vFP48.02 Fab in complex with BG505 DS-SOSIP Env trimer | |
| 8G4M | Q2N0S6 | Vaccine-elicited human antibody 2C06 in complex with HIV-1 envelope trimer BG505 DS-SOSIP | |
| 8G4T | Q2N0S6 | Vaccine-elicited human antibody 2C09 in complex with HIV-1 envelope trimer BG505 DS-SOSIP | |
| 7SQ1 | Q2N0S6 | BG505.MD39TS Env trimer in complex with Fab from antibody C05 | |
| 7UOJ | Q2N0S6 | The CryoEM structure of N49-P9.6-FR3 and PGT121 Fabs in complex with BG505 SOSIP.664 | |
| 7T9B | Q2N0S6 | ApexGT5 in complex with GT5-d42.16 and RM20A3 Fabs | |
| 8FK5 | Q2N0S6 | Cryo-EM Structure of PG9RSH DU011 Fab in complex with BG505 DS-SOSIP.664 | |
| 8FL1 | Q2N0S6 | Cryo-EM Structure of PG9RSH DU025 Fab in complex with BG505 DS-SOSIP.664 | |
| 8FLW | Q2N0S6 | Cryo-EM Structure of PGT145 DU303 Fab in complex with BG505 DS-SOSIP.664 | |
| 8E1P | Q2N0S6 | Crystal structure of BG505 SOSIP.v4.1-GT1.2 trimer in complex with gl-PGV20 and PGT124 Fabs | |
| 8TJR | Q2N0S6 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO HERH-c.01 FAB | |
| 8TJS | Q2N0S6 | CRYO-EM STRUCTURE OF HIV-1 BG505DS-SOSIP.664 ENV TRIMER BOUND TO GPZ6-a.01 FAB | |
| 8TOP | Q2N0S6 | Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with antibody GPZ6-b.01 targeting the fusion peptide | |
| 8TQ1 | Q2N0S6 | HIV-1 BG505 Env SOSIP in complex with bovine Fab Bess4 and non-human primate Fab RM20A3 | |
| 8SW4 | Q2N0S6 | BG505 GT1.1 SOSIP in complex with NHP Fabs 21N13, 21M20 and RM20A3 | |
| 6CDE | Q2N0S5 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | PGT122 Heavy chain, PGT122 Light Chain, VRC03 Light Chain, VRC03 Heavy Chain, Glycoprotein 41, Glycoprotein 120, vFP20.01 Heavy Chain, vFP20.01 Heavy chain |
| 6UDA | Q2N0S5 | Cryo-EM structure of CH235UCA bound to Man5-enriched CH505.N279K.G458Y.SOSIP.664 | CH505.N279K.G458Y.SOSIP.664 gp120, CH235 UCA heavy chain Fab, CH505.N279K.G458Y.SOSIP.664 gp41, CH235 UCA light chain Fab |
| 5U7M | Q2N0S5 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-378806 in Complex with Human Antibodies PGT122 and 35O22 at 3.8 Angstrom | Envelope glycoprotein gp160, 35O22 HEAVY CHAIN, 35O22 LIGHT CHAIN, PGT122 HEAVY CHAIN, PGT122 LIGHT CHAIN |
| 5U7O | Q2N0S5 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-626529 in Complex with Human Antibodies PGT122 and 35O22 at 3.8 Angstrom | Envelope glycoprotein gp160, 35O22 FAB HEAVY CHAIN, 35O22 FAB LIGHT CHAIN, PGT122 FAB HEAVY CHAIN, PGT122 FAB LIGHT CHAIN |
| 6CDI | Q2N0S5 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | VRC03 Heavy Chain, VRC03 light chain, PGT122 Heavy Chain, PGT122 Light Chain, Glycoprotein 120, Glycoprotein gp41, vFP16.02 Heavy Chain, vFP16.02 Light Chain |
| 6CE0 | Q2N0S5 | Crystal structure of a HIV-1 clade B tier-3 isolate H078.14 UFO-BG Env trimer in complex with broadly neutralizing Fabs PGT124 and 35O22 at 4.6 Angstrom | |
| 6CM3 | Q2N0S5 | BG505 SOSIP in complex with sCD4, 17b, 8ANC195 | Envelope glycoprotein gp160, T-cell surface glycoprotein CD4, 17b Fab light chain, 17b Fab heavy chain, 8ANC195 Fab heavy chain, 8ANC195 Fab light chain |
| 6CRQ | Q2N0S5 | Glutaraldehyde-treated BG505 SOSIP.664 Env in complex with PGV04 Fab | |
| 6DFH | Q2N0S5 | BG505 MD64 N332-GT2 SOSIP trimer in complex with germline-reverted BG18 fragment antigen binding | Envelope glycoprotein gp160, germline-reverted BG18 fragment antigen binding heavy chain, germline-reverted BG18 fragment antigen binding light chain |
| 7KLC | Q2N0S5 | Crystal structure of M4H2K1 Fab bound to HIV-1 BG505 gp120 core and to 17b Fab | |
| 7L8E | Q2N0S5 | BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-1 from animal Rh.33172 (Wk38 time point) | |
| 6VY2 | Q2N0S5 | Cryo-EM structure of M1214_N1 Fab in complex with CH505 TF chimeric SOSIP.664 Env trimer | Glycoprotein 120, Glycoprotein 41, M1214 N1 Fab heavy chain, M1214 N1 Fab light chain |
| 7L8F | Q2N0S5 | BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-2 from animal Rh.33172 (Wk38 time point) | |
| 7L8G | Q2N0S5 | BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-3 from animal Rh.33172 (Wk38 time point) | |
| 4TVP | Q2N0S5 | Crystal Structure of the HIV-1 BG505 SOSIP.664 Env Trimer Ectodomain, Comprising Atomic-Level Definition of Pre-Fusion gp120 and gp41, in Complex with Human Antibodies PGT122 and 35O22 | |
| 7UGP | Q2N0S5 | Cryo-EM structure of BG24 Fabs with an inferred germline light chain and 10-1074 Fabs in complex with HIV-1 Env immunogen BG505-SOSIPv4.1-GT1 containing the N276 gp120 glycan- Class 1 | |
| 7TCN | Q2N0S5 | Cryo-EM structure of CH235.12 in complex with HIV-1 Env trimer CH505TF.N279K.SOSIP.664 with high-mannose glycans | |
| 7TCO | Q2N0S5 | Cryo-EM structure of CH235.12 in complex with HIV-1 Env trimer CH505TF.N279K.G458Y.SOSIP.664 with high-mannose glycans | |
| 7UGN | Q2N0S5 | Cryo-EM structure of BG24 inferred germline Fabs with germline CDR3s and 10-1074 Fabs in complex with HIV-1 Env immunogen BG505-SOSIPv4.1-GT1 - Class 1 | |
| 7UGO | Q2N0S5 | Cryo-EM structure of BG24 inferred germline Fabs with mature CDR3s and 10-1074 Fabs in complex with HIV-1 Env immunogen BG505-SOSIPv4.1-GT1 | |
| 8TTW | Q2N0S5 | Cryo-EM structure of BG505 SOSIP.664 HIV-1 Env trimer in complex with temsavir, 8ANC195, and 10-1074 | |
| 8C8T | Q2N0S5 | cryo-EM structure of BG505 SOSIP.664 HIV-1 Env trimer in complex with bNAbs EPTC112 and 3BNC117 | |
| 8FYI | Q2N0S5 | Structure of HIV-1 BG505 SOSIP-HT1 in complex with one CD4 molecule |
