GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
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GlycoNAVI Proteins | November 21, 2024 |
PDB ID | UniProt ID | Title | Descriptor ▲ |
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1GZ1 | 1GZ1 | Mutant D416A of the CELLOBIOHYDROLASE CEL6A FROM HUMICOLA INSOLENS in complex with methyl-cellobiosyl-4-deoxy-4-thio-beta-D-cellobioside | CELLOBIOHYDROLASE II (E.C.3.2.1.91) |
1D7B | 1314367 | CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 7.5 | CELLOBIOSE DEHYDROGENASE (E.C.1.1.3.25) |
1D7C | 1314367 | CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 4.6 | CELLOBIOSE DEHYDROGENASE (E.C.1.1.3.25) |
1D7D | 1314367 | CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, HP3 FRAGMENT, PH 7.5 | CELLOBIOSE DEHYDROGENASE (E.C.1.1.3.25) |
2XQO | A3DCJ4 | CtCel124: a cellulase from Clostridium thermocellum | CELLULOSOME ENZYME, DOCKERIN TYPE I |
1KCW | P00450 | X-RAY CRYSTAL STRUCTURE OF HUMAN CERULOPLASMIN AT 3.0 ANGSTROMS | CERULOPLASMIN, OXYGEN ATOM |
6UDA | M4M0W3 | Cryo-EM structure of CH235UCA bound to Man5-enriched CH505.N279K.G458Y.SOSIP.664 | CH505.N279K.G458Y.SOSIP.664 gp120, CH235 UCA heavy chain Fab, CH505.N279K.G458Y.SOSIP.664 gp41, CH235 UCA light chain Fab |
6UDA | 6UDA | Cryo-EM structure of CH235UCA bound to Man5-enriched CH505.N279K.G458Y.SOSIP.664 | CH505.N279K.G458Y.SOSIP.664 gp120, CH235 UCA heavy chain Fab, CH505.N279K.G458Y.SOSIP.664 gp41, CH235 UCA light chain Fab |
6UDA | Q2N0S5 | Cryo-EM structure of CH235UCA bound to Man5-enriched CH505.N279K.G458Y.SOSIP.664 | CH505.N279K.G458Y.SOSIP.664 gp120, CH235 UCA heavy chain Fab, CH505.N279K.G458Y.SOSIP.664 gp41, CH235 UCA light chain Fab |
7LUA | A0A1W6IPB2 | Cryo-EM structure of DH898.1 Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer | CH848 SOSIP gp120, CH848 SOSIP gp41, DH898.1 light chain, DH898.1 heavy chain |
7LUA | A0A6H1VEB8 | Cryo-EM structure of DH898.1 Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer | CH848 SOSIP gp120, CH848 SOSIP gp41, DH898.1 light chain, DH898.1 heavy chain |
7LUA | 7LUA | Cryo-EM structure of DH898.1 Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer | CH848 SOSIP gp120, CH848 SOSIP gp41, DH898.1 light chain, DH898.1 heavy chain |
7L6O | A0A1W6IPB2 | Cryo-EM structure of HIV-1 Env CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 | CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 - gp120, CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 - gp41 |
7L6O | 7L6O | Cryo-EM structure of HIV-1 Env CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 | CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 - gp120, CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 - gp41 |
4AY1 | Q15782 | Human YKL-39 is a pseudo-chitinase with retained chitooligosaccharide binding properties | CHITINASE-3-LIKE PROTEIN 2 |
1CPO | P04963 | CHLOROPEROXIDASE | CHLOROPEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE |
2CPO | P04963 | CHLOROPEROXIDASE | CHLOROPEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE |
1LLR | 48890 | CHOLERA TOXIN B-PENTAMER WITH LIGAND BMSC-0012 | CHOLERA TOXIN B SUBUNIT |
1CLE | P32947 | STRUCTURE OF UNCOMPLEXED AND LINOLEATE-BOUND CANDIDA CYLINDRACEA CHOLESTEROL ESTERASE | CHOLESTEROL ESTERASE, CHOLESTERYL LINOLEATE |
1HM2 | Q59288 | ACTIVE SITE OF CHONDROITINASE AC LYASE REVEALED BY THE STRUCTURE OF ENZYME-OLIGOSACCHARIDE COMPLEXES AND MUTAGENESIS | CHONDROITINASE AC (E.C.4.2.2.5) |
1HM3 | Q59288 | ACTIVE SITE OF CHONDROITINASE AC LYASE REVEALED BY THE STRUCTURE OF ENZYME-OLIGOSACCHARIDE COMPLEXES AND MUTAGENESIS | CHONDROITINASE AC (E.C.4.2.2.5) |
1HMU | Q59288 | ACTIVE SITE OF CHONDROITINASE AC LYASE REVEALED BY THE STRUCTURE OF ENZYME-OLIGOSACCHARIDE COMPLEXES AND MUTAGENESIS | CHONDROITINASE AC (E.C.4.2.2.5) |
1HMW | Q59288 | ACTIVE SITE OF CHONDROITINASE AC LYASE REVEALED BY THE STRUCTURE OF ENZYME-OLIGOSACCHARIDE COMPLEXES AND MUTAGENESIS | CHONDROITINASE AC (E.C.4.2.2.5) |
1DBO | U27584 | CRYSTAL STRUCTURE OF CHONDROITINASE B | CHONDROITINASE B |
1E9J | P01215 | SOLUTION STRUCTURE OF THE A-SUBUNIT OF HUMAN CHORIONIC GONADOTROPIN [INCLUDING A SINGLE GLCNAC RESIDUE AT ASN52 AND ASN78] | CHORIONIC GONADOTROPIN |
1HD4 | P01215 | SOLUTION STRUCTURE OF THE A-SUBUNIT OF HUMAN CHORIONIC GONADOTROPIN [MODELED WITH DIANTENNARY GLYCAN AT ASN78] | CHORIONIC GONADOTROPIN |
3ZYP | Q7Z9M9 | Cellulose induced protein, Cip1 | CIP1 |
1DL2 | P32906 | CRYSTAL STRUCTURE OF CLASS I ALPHA-1,2-MANNOSIDASE FROM SACCHAROMYCES CEREVISIAE AT 1.54 ANGSTROM RESOLUTION | CLASS I ALPHA-1,2-MANNOSIDASE (E.C.3.2.1.113) |
2C4F | P08709 | crystal structure of factor VII.stf complexed with pd0297121 | COAGULATION FACTOR VII PRECURSOR (E.C.3.4.21.21), TISSUE FACTOR PRECURSOR |
2C4F | P13726 | crystal structure of factor VII.stf complexed with pd0297121 | COAGULATION FACTOR VII PRECURSOR (E.C.3.4.21.21), TISSUE FACTOR PRECURSOR |
6H03 | P01031 | OPEN CONFORMATION OF THE MEMBRANE ATTACK COMPLEX | COMPLEMENT C5,COMPLEMENT C5, COMPLEMENT COMPONENT C6, COMPLEMENT COMPONENT C8 BETA CHAIN, COMPLEMENT COMPONENT C7, COMPLEMENT COMPONENT C8 GAMMA CHAIN, COMPLEMENT COMPONENT C8 ALPHA CHAIN, COMPLEMENT COMPONENT C9 |
6H03 | P13671 | OPEN CONFORMATION OF THE MEMBRANE ATTACK COMPLEX | COMPLEMENT C5,COMPLEMENT C5, COMPLEMENT COMPONENT C6, COMPLEMENT COMPONENT C8 BETA CHAIN, COMPLEMENT COMPONENT C7, COMPLEMENT COMPONENT C8 GAMMA CHAIN, COMPLEMENT COMPONENT C8 ALPHA CHAIN, COMPLEMENT COMPONENT C9 |
6H03 | P07358 | OPEN CONFORMATION OF THE MEMBRANE ATTACK COMPLEX | COMPLEMENT C5,COMPLEMENT C5, COMPLEMENT COMPONENT C6, COMPLEMENT COMPONENT C8 BETA CHAIN, COMPLEMENT COMPONENT C7, COMPLEMENT COMPONENT C8 GAMMA CHAIN, COMPLEMENT COMPONENT C8 ALPHA CHAIN, COMPLEMENT COMPONENT C9 |
6H03 | P10643 | OPEN CONFORMATION OF THE MEMBRANE ATTACK COMPLEX | COMPLEMENT C5,COMPLEMENT C5, COMPLEMENT COMPONENT C6, COMPLEMENT COMPONENT C8 BETA CHAIN, COMPLEMENT COMPONENT C7, COMPLEMENT COMPONENT C8 GAMMA CHAIN, COMPLEMENT COMPONENT C8 ALPHA CHAIN, COMPLEMENT COMPONENT C9 |
6H03 | P07360 | OPEN CONFORMATION OF THE MEMBRANE ATTACK COMPLEX | COMPLEMENT C5,COMPLEMENT C5, COMPLEMENT COMPONENT C6, COMPLEMENT COMPONENT C8 BETA CHAIN, COMPLEMENT COMPONENT C7, COMPLEMENT COMPONENT C8 GAMMA CHAIN, COMPLEMENT COMPONENT C8 ALPHA CHAIN, COMPLEMENT COMPONENT C9 |
6H03 | P07357 | OPEN CONFORMATION OF THE MEMBRANE ATTACK COMPLEX | COMPLEMENT C5,COMPLEMENT C5, COMPLEMENT COMPONENT C6, COMPLEMENT COMPONENT C8 BETA CHAIN, COMPLEMENT COMPONENT C7, COMPLEMENT COMPONENT C8 GAMMA CHAIN, COMPLEMENT COMPONENT C8 ALPHA CHAIN, COMPLEMENT COMPONENT C9 |
6H03 | P02748 | OPEN CONFORMATION OF THE MEMBRANE ATTACK COMPLEX | COMPLEMENT C5,COMPLEMENT C5, COMPLEMENT COMPONENT C6, COMPLEMENT COMPONENT C8 BETA CHAIN, COMPLEMENT COMPONENT C7, COMPLEMENT COMPONENT C8 GAMMA CHAIN, COMPLEMENT COMPONENT C8 ALPHA CHAIN, COMPLEMENT COMPONENT C9 |
4B1Q | P58928 | NMR structure of the glycosylated conotoxin CcTx from Conus consors | CONOTOXIN CCTX |
1KSI | Q43077 | CRYSTAL STRUCTURE OF A EUKARYOTIC (PEA SEEDLING) COPPER-CONTAINING AMINE OXIDASE AT 2.2A RESOLUTION | COPPER AMINE OXIDASE |
7ND4 | P0DTC2 | EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-88 Fab | COVOX-158 heavy chain, COVOX-158 light chain, Spike glycoprotein |
7ND4 | 7ND4 | EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-88 Fab | COVOX-158 heavy chain, COVOX-158 light chain, Spike glycoprotein |
7ND5 | P0DTC2 | EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-150 Fab | COVOX-158 heavy chain, COVOX-158 light chain, Spike glycoprotein |
7ND5 | 7ND5 | EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-150 Fab | COVOX-158 heavy chain, COVOX-158 light chain, Spike glycoprotein |
7ND6 | P0DTC2 | EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-40 Fab | COVOX-158 heavy chain, COVOX-158 light chain, Spike glycoprotein |
7ND6 | 7ND6 | EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-40 Fab | COVOX-158 heavy chain, COVOX-158 light chain, Spike glycoprotein |
7ND7 | P0DTC2 | EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab | COVOX-158 heavy chain, COVOX-158 light chain, Spike glycoprotein |
7ND7 | 7ND7 | EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab | COVOX-158 heavy chain, COVOX-158 light chain, Spike glycoprotein |
7ND8 | P0DTC2 | EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-384 Fab | COVOX-158 heavy chain, COVOX-158 light chain, Spike glycoprotein |
7ND8 | 7ND8 | EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-384 Fab | COVOX-158 heavy chain, COVOX-158 light chain, Spike glycoprotein |
7ND9 | P0DTC2 | EM structure of SARS-CoV-2 Spike glycoprotein (one RBD up) in complex with COVOX-253H55L Fab | COVOX-158 heavy chain, COVOX-158 light chain, Spike glycoprotein |
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: August 19, 2024