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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | November 21, 2024 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 5HO9 | B3EYN2 | Structure of truncated AbnA (domains 1-3), a GH43 arabinanase from Geobacilllus stearothermophilus, in complex with arabinooctaose | |
| 5HOF | B3EYN2 | Crystal structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinopentaose | |
| 5HON | B3EYN2 | Structure of Domain 4 of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinotriose | |
| 4V7Q | B3F2X3 | Atomic model of an infectious rotavirus particle | Core scaffold protein, Intermediate capsid protein VP6 |
| 2X8S | B3FRL6 | Crystal Structure of the Abn2 D171A mutant in complex with arabinotriose | |
| 2LIQ | B3GA02 | Solution structure of CCL2 in complex with glycan | |
| 4USO | B3GA02 | X-ray structure of the CCL2 lectin in complex with sialyl lewis X | |
| 8UVU | B3GTD7 | Structure of the insect gustatory receptor Gr9 from Bombyx mori in complex with D-fructose | |
| 8VV3 | B3GTD7 | Structure of the insect gustatory receptor Gr9 from Bombyx mori in complex with L-sorbose | |
| 6ELC | B3GVK1 | Crystal Structure of O-linked Glycosylated VSG3 | |
| 7P59 | B3GVK1 | Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) with two O-linked post-translational modifications | |
| 7P5A | B3GVK1 | Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) mutant (serine 317 to alanine), single O-linked glycosylated at Ser319 | |
| 7P5B | B3GVK1 | Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) mutant (serine 319 to alanine), single O-linked glycosylated at Ser317 | |
| 7P5D | B3GVK1 | Variant Surface Glycoprotein 3 (VSG3, MiTat1.3, VSG224) mutant (serine 317 and 319 to alanine) | |
| 8OK4 | B3GVS7 | Variant Surface Glycoprotein VSG11wt-Oil | |
| 8OK5 | B3GVS7 | Variant Surface Glycoprotein VSG11 monomer with iodine | |
| 8OK6 | B3GVS7 | Variant Surface Glycoprotein VSG11 two monomers | |
| 8ONH | B3GVS7 | Variant Surface Glycoprotein VSG11wt-Oil | |
| 7WG5 | B3H6Z4 | Cyclic electron transport supercomplex NDH-PSI from Arabidopsis | |
| 4GQ7 | B3IUA8 | Crystal structure of Lg-Flo1p | |
| 4LHK | B3IUB3 | Structure of the N-terminal domain of the Lg-Flo1 adhesin (N-Lg-Flo1p) from the yeast Saccharomyces pastorianus, in complex with calcium and alpha-1,2-mannobiose | |
| 5IUE | B3KUD8 | Human leukocyte antigen F (HLA-F) presents peptides and regulates immunity through interactions with NK-cell receptors | |
| 5KNM | B3KUD8 | Human leukocyte antigen F (HLA-F) presents peptides and regulates immunity through interactions with NK-cell receptors | |
| 2XVK | B3PBD9 | crystal structure of alpha-xylosidase (GH31) from Cellvibrio japonicus in complex with 5-fluoro-alpha-D-xylopyranosyl fluoride | |
| 2WHM | B3PBK3 | Cellvibrio japonicus Man26A E121A and E320G double mutant in complex with mannobiose | |
| 8BQA | B3PCS3 | CjCel5B endo-glucanase bound to CB665 covalent inhibitor | |
| 6HA9 | B3PD52 | Structure of an endo-Xyloglucanase from Cellvibrio japonicus complexed with XXXG(2F)-beta-DNP | |
| 5OYD | B3PD52 | GH5 endo-xyloglucanase from Cellvibrio japonicus | |
| 5OYE | B3PD52 | GH5 endo-xyloglucanase from Cellvibrio japonicus | |
| 6HAA | B3PD52 | Structure of a covalent complex of endo-Xyloglucanase from Cellvibrio japonicus after reacting with XXXG(2F)-beta-DNP | |
| 8OZ1 | B3PD52 | CjCel5D endo-xyloglucanase bounc to CB665 covalent inhibitor | |
| 3QEF | B3PD60 | The structure and function of an arabinan-specific alpha-1,2-arabinofuranosidase identified from screening the activities of bacterial GH43 glycoside hydrolases | |
| 4B9Z | B3PEE6 | Crystal Structure of Agd31B, alpha-transglucosylase, complexed with Acarbose | |
| 4BA0 | B3PEE6 | Crystal Structure of Agd31B, alpha-transglucosylase, complexed with 5F-alpha-GlcF | |
| 8BQB | B3PF55 | CjCel5C endo-glucanase bound to CB396 covalent inhibitor | |
| 4CD4 | B3PGI1 | The structure of GH26 beta-mannanase CjMan26C from Cellvibrio japonicus in complex with ManIFG | |
| 4CD5 | B3PGI1 | The structure of GH26 beta-mannanase CjMan26C from Cellvibrio japonicus in complex with ManMIm | |
| 5FKS | B3PKK9 | Unraveling the first step of xyloglucan degradation by the soil saprophyte Cellvibrio japonicus through the functional and structural characterization of a potent GH74 endo-xyloglucanase | |
| 4H04 | B3TLD6 | Lacto-N-biosidase from Bifidobacterium bifidum | Lacto-N-biosidase (E.C.3.2.1.140) |
| 4JAW | B3TLD6 | Crystal Structure of Lacto-N-Biosidase from Bifidobacterium bifidum complexed with LNB-thiazoline | |
| 5BXP | B3TLD6 | LNBase in complex with LNB-LOGNAc | |
| 5BXR | B3TLD6 | LNBase in complex with LNB-NHAcDNJ | |
| 5BXS | B3TLD6 | LNBase in complex with LNB-NHAcCAS | |
| 5BXT | B3TLD6 | LNBase in complex with LNB-NHAcAUS | |
| 6OPO | B3UES2 | Symmetric model of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex with DDM | Envelope glycoprotein gp160, 17b Fab light chain, Envelope glycoprotein gp41, T-cell surface glycoprotein CD4, 17b Fab heavy chain |
| 6U59 | B3UES2 | HIV-1 B41 SOSIP.664 in complex with rabbit antibody 13B | SOSIP.664 gp120, SOSIP.664 gp41, rabbit antibody 13B Fragment antigen binding light chain, rabbit antibody 13B Fragment antigen binding heavy chain |
| 6U59 | B3UES2 | HIV-1 B41 SOSIP.664 in complex with rabbit antibody 13B | SOSIP.664 gp120, SOSIP.664 gp41, rabbit antibody 13B Fragment antigen binding light chain, rabbit antibody 13B Fragment antigen binding heavy chain |
| 6MDT | B3UES2 | Crystal structure of the B41 SOSIP.664 Env trimer with PGT124 and 35O22 Fabs, in P63 space group | |
| 6MUF | B3UES2 | Crystal Structure of HIV-1 B41 SOSIP.664 Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.4 Angstrom | Envelope glycoprotein gp160, 35O22 scFv heavy chain portion, 35O22 scFv light chain portion, 3H109L Fab heavy chain, 3H109L Fab light chain |
| 6OPQ | B3UES2 | CD4- and 17-bound HIV-1 Env B41 SOSIP frozen with LMNG | Envelope glycoprotein gp160, 17b Fab light chain, Envelope glycoprotein gp41, T-cell surface glycoprotein CD4, 17b Fab heavy chain |
