GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
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GlycoNAVI Proteins | November 14, 2024 |
PDB ID | UniProt ID | Title | Descriptor ▼ |
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6FTI | P60467 | Cryo-EM Structure of the Mammalian Oligosaccharyltransferase Bound to Sec61 and the Programmed 80S Ribosome | uL2, uL3, Ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, uL30, eL8, uL6, Ribosomal protein L10 (Predicted), Ribosomal protein L11, eL13, Ribosomal protein L14, Ribosomal protein L15, uL13, uL22, uL14, eL19, eL20, Uncharacterized protein, eL22, Ribosomal protein L24, uL23, Ribosomal protein L26, 60S ribosomal protein L27, uL15, 60S ribosomal protein L29, eL30, eL31, eL32, eL33, eL34, uL29, 60S ribosomal protein L36, Ribosomal protein L37, eL38, eL39, eL40, 60s ribosomal protein l41, eL42, Ribosomal protein L37a, eL28, 60S acidic ribosomal protein P0, Ribosomal protein L12, Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit gamma, Protein transport protein Sec61 subunit beta, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1,RPN1, TMEM258, Oligosaccharyltransferase complex subunit OSTC, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, DAD1, OST48, RPN1, Unidentified TM/RNA Complex |
5DX9 | Q059G6 | Structure of trehalose-6-phosphate phosphatase from Cryptococcus neoformans | trehalose-6-phosphate phosphatase (E.C.2.4.1.15) |
1YO8 | P35442 | Structure of the C-terminal domain of human thrombospondin-2 | thrombospondin-2 |
5EW2 | P00734 | Human thrombin sandwiched between two DNA aptamers: HD22 and HD1-deltaT12 | thrombin light chain, Thrombin heavy chain/DNA Complex |
1TJY | Q8Z2X8 | Crystal Structure of Salmonella typhimurium AI-2 receptor LsrB in complex with R-THMF | sugar transport protein |
4PZ0 | Q81P43 | The crystal structure of a solute binding protein from Bacillus anthracis str. Ames in complex with quorum-sensing signal autoinducer-2 (AI-2) | sugar ABC transporter, sugar-binding protein |
2GDU | Q84HQ2 | E232Q mutant of sucrose phosphorylase from BIFIDOBACTERIUM ADOLESCENTIS in complex with sucrose | sucrose phosphorylase (E.C.2.4.1.7) |
5XEB | P27427 | Structure of the envelope glycoprotein of Dhori virus | structural protein E, strutural protein M, Z23 Fab heavy chain, Z23 Fab light chain |
5IZ7 | A0A024B7W1 | Cryo-EM structure of thermally stable Zika virus strain H/PF/2013 | structural protein E, structural protein M |
5IZ7 | A0A0U4DG08 | Cryo-EM structure of thermally stable Zika virus strain H/PF/2013 | structural protein E, structural protein M |
6U7H | 6U7H | Cryo-EM structure of the HCoV-229E spike glycoprotein | spike glycoprotein |
7CN8 | 7CN8 | Cryo-EM structure of PCoV_GX spike glycoprotein | spike glycoprotein |
6VXX | P0DTC2 | Structure of the SARS-CoV-2 spike glycoprotein (closed state) | spike glycoprotein |
6VYB | P0DTC2 | SARS-CoV-2 spike ectodomain structure (open state) | spike glycoprotein |
4X8R | A3PLM5 | CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM Rhodobacter sphaeroides (Rsph17029_2138, TARGET EFI-510205) WITH BOUND Glucuronate | solute binding protein |
1Z1N | Q8VUI3 | Crystal Structure of the sixteen heme cytochrome from Desulfovibrio gigas | sixteen heme cytochrome |
2FHR | 2894810 | Trypanosoma Rangeli Sialidase In Complex With 2,3- Difluorosialic Acid (Covalent Intermediate) | sialidase (E.C.3.2.1.18) |
1MZ6 | O44049 | Trypanosoma rangeli sialidase in complex with the inhibitor DANA | sialidase (3.2.1.18), 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID |
1MZ5 | O44049 | Trypanosoma rangeli sialidase | sialidase (3.2.1.18) |
6KA7 | 6KA7 | The complex structure of Human IgG Fc and its binding Repebody | repebody, Immunoglobulin gamma-1 heavy chain |
6KA7 | P0DOX5 | The complex structure of Human IgG Fc and its binding Repebody | repebody, Immunoglobulin gamma-1 heavy chain |
4ZJF | A0A097F5U5 | Crystal structure of GP1 - the receptor binding domain of Lassa virus | receptor binding domain (GP1) from the surface glycoprotein of Lassa virus |
1JUH | Q7SIC2 | Crystal Structure of Quercetin 2,3-dioxygenase | quercetin 2,3-dioxygenase, 1,2-ETHANEDIOL |
3K4H | 3K4H | CRYSTAL STRUCTURE OF putative transcriptional regulator LacI from Bacillus cereus subsp. cytotoxis NVH 391-98 | putative transcriptional regulator |
3IC3 | Q6N5V5 | Structure of a putative pyruvate dehydrogenase from the photosynthetic bacterium Rhodopseudomonas palustrus CGA009 | putative pyruvate dehydrogenase |
2B0C | P0A8Y3 | The crystal structure of the putative phosphatase from Escherichia coli | putative phosphatase |
1S2D | Q8RLY5 | Purine 2'-Deoxyribosyl complex with arabinoside: Ribosylated Intermediate (AraA) | purine trans deoxyribosylase (E.C.2.4.2.6) |
6VG1 | Q6GLU2 | xenopus protocadherin 8.1 EC1-6 | protocadherin protein |
3EJA | 3EJA | Magnesium-bound glycoside hydrolase 61 isoform E from Thielavia terrestris | protein GH61E |
1ND6 | P15309 | Crystal Structures of Human Prostatic Acid Phosphatase in Complex with a Phosphate Ion and alpha-Benzylaminobenzylphosphonic Acid Update the Mechanistic Picture and Offer New Insights into Inhibitor Design | prostatic acid phosphatase (E.C.3.1.3.2) |
4YCG | Q9WV56 | Pro-bone morphogenetic protein 9 | pro-BMP9 prodomain, human BMP9 growth factor |
4YCG | Q9UK05 | Pro-bone morphogenetic protein 9 | pro-BMP9 prodomain, human BMP9 growth factor |
7D8Z | Q9H2X9 | human potassium-chloride co-transporter KCC2 | potassium-chloride cotransporter 2 |
4EIS | Q7SA19 | Structural basis for substrate targeting and catalysis by fungal polysaccharide monooxygenases (PMO-3) | polysaccharide monooxygenase-3 |
6E4Q | Q8MRC9 | Crystal Structure of the Drosophila Melanogaster Polypeptide N-Acetylgalactosaminyl Transferase PGANT9A in Complex with UDP and Mn2+ | polypeptide N-acetylgalactosaminyltransferase 9 (E.C.2.4.1.41) |
1IA5 | 3220207 | POLYGALACTURONASE FROM ASPERGILLUS ACULEATUS | polygalacturonase (E.C.3.2.1.15) |
4Z5W | Q8LPB4 | The plant peptide hormone receptor | plant peptide hormone receptor |
4Z5W | 4Z5W | The plant peptide hormone receptor | plant peptide hormone receptor |
4Y28 | 4Y28 | The structure of plant photosystem I super-complex at 2.8 angstrom resolution. | photosystem I reaction center (E.C.1.97.1.12) |
4Y28 | Q41038 | The structure of plant photosystem I super-complex at 2.8 angstrom resolution. | photosystem I reaction center (E.C.1.97.1.12) |
4Y28 | Q32904 | The structure of plant photosystem I super-complex at 2.8 angstrom resolution. | photosystem I reaction center (E.C.1.97.1.12) |
4Y28 | Q9SQL2 | The structure of plant photosystem I super-complex at 2.8 angstrom resolution. | photosystem I reaction center (E.C.1.97.1.12) |
4Y28 | P05310 | The structure of plant photosystem I super-complex at 2.8 angstrom resolution. | photosystem I reaction center (E.C.1.97.1.12) |
4Y28 | P05311 | The structure of plant photosystem I super-complex at 2.8 angstrom resolution. | photosystem I reaction center (E.C.1.97.1.12) |
4Y28 | P10793 | The structure of plant photosystem I super-complex at 2.8 angstrom resolution. | photosystem I reaction center (E.C.1.97.1.12) |
4Y28 | P17227 | The structure of plant photosystem I super-complex at 2.8 angstrom resolution. | photosystem I reaction center (E.C.1.97.1.12) |
4Y28 | D5MAL3 | The structure of plant photosystem I super-complex at 2.8 angstrom resolution. | photosystem I reaction center (E.C.1.97.1.12) |
1X3Z | 6325161 | Structure of a peptide:N-glycanase-Rad23 complex | peptide:N-glycanase (E.C.3.5.1.52), UV excision repair protein RAD23, peptide Val-Ala-Asp |
1X3Z | P32628 | Structure of a peptide:N-glycanase-Rad23 complex | peptide:N-glycanase (E.C.3.5.1.52), UV excision repair protein RAD23, peptide Val-Ala-Asp |
1X3Z | 1X3Z | Structure of a peptide:N-glycanase-Rad23 complex | peptide:N-glycanase (E.C.3.5.1.52), UV excision repair protein RAD23, peptide Val-Ala-Asp |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: August 19, 2024