GlycoNAVI Proteins

GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.

Source Last Updated
GlycoNAVI Proteins December 11, 2024
Displaying entries 16451 - 16500 of 40384 in total
PDB ID ▼ UniProt ID Title Descriptor
6ZE7 6ZE7 Chaetomium thermophilum FAD-dependent oxidoreductase in complex with 4-nitrophenol
6ZE6 6ZE6 FAD-dependent oxidoreductase from Chaetomium thermophilum in complex with fragment 4-nitrocatechol
6ZE5 6ZE5 FAD-dependent oxidoreductase from Chaetomium thermophilum in complex with fragment 2-(1H-indol-3-yl)-N-[(1-methyl-1H-pyrrol-2-yl)methyl]ethanamine
6ZE4 6ZE4 FAD-dependent oxidoreductase from Chaetomium thermophilum in complex with fragment 4-oxo-N-[(1S)-1-(pyridin-3-yl)ethyl]-4-(thiophen-2-yl)butanamide
6ZE3 6ZE3 FAD-dependent oxidoreductase from Chaetomium thermophilum in complex with fragment (4-methoxycarbonylphenyl)methylazanium
6ZE2 6ZE2 FAD-dependent oxidoreductase from Chaetomium thermophilum
6ZDX Q8I4N9 RIFIN variable region bound to LILRB1 ectodomain
6ZDX A0A0G2JQ46 RIFIN variable region bound to LILRB1 ectodomain
6ZDM Q9Y251 Crystal structure of human heparanase in complex with a N',6O'-bis-sulfated 4-methylumbelliferyl heparan sulfate disaccharide
6ZDL Q5SRI9 Structure of the catalytic domain of human endo-alpha-mannosidase MANEA in complex with GlcIFG and hexatungstotellurate(VI) TEW
6ZDH P0DTC2 SARS-CoV-2 Spike glycoprotein in complex with a neutralizing antibody EY6A Fab
6ZDH 6ZDH SARS-CoV-2 Spike glycoprotein in complex with a neutralizing antibody EY6A Fab
6ZDG P0DTC2 Association of three complexes of largely structurally disordered Spike ectodomain with bound EY6A Fab
6ZDG 6ZDG Association of three complexes of largely structurally disordered Spike ectodomain with bound EY6A Fab
6ZCZ P0DTC2 Crystal structure of receptor binding domain of SARS-CoV-2 Spike glycoprotein in ternary complex with EY6A Fab and a nanobody.
6ZCZ 6ZCZ Crystal structure of receptor binding domain of SARS-CoV-2 Spike glycoprotein in ternary complex with EY6A Fab and a nanobody.
6ZBX Q9Z4P9 Structure of the catalytic domain of the Bacillus circulans alpha-1,6 Mannanase in complex with an alpha-1,6- alpha-manno-cyclophellitol carbasugar-stabilised trisaccharide inhibitor
6ZBX 6ZBX Structure of the catalytic domain of the Bacillus circulans alpha-1,6 Mannanase in complex with an alpha-1,6- alpha-manno-cyclophellitol carbasugar-stabilised trisaccharide inhibitor
6ZBW Q9Z4P9 Structure of the D125N mutant of the catalytic domain of the Bacillus circulans alpha-1,6 Mannanase in complex with an alpha-1,6-alpha-manno-cyclophellitol trisaccharide inhibitor
6ZBP P0DTC2 H11-H4 complex with SARS-CoV-2
6ZBP 6ZBP H11-H4 complex with SARS-CoV-2
6ZBM Q9Z4P9 Structure of the D125N mutant of the catalytic domain of the Bacillus circulans alpha-1,6 Mannanase in complex with an alpha-1,6-alpha-manno-cyclophellitol carbasugar-stabilised trisaccharide inhibitor
6ZB5 P0DTC2 SARS CoV-2 Spike protein, Closed conformation, C3 symmetry
6ZB4 P0DTC2 SARS CoV-2 Spike protein, Closed conformation, C1 symmetry
6ZAZ Q8A6W4 Fructo-oligosaccharide transporter BT 1762-63
6ZAZ Q8A6W3 Fructo-oligosaccharide transporter BT 1762-63
6ZAX H0SLX7 Nitrite-bound copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) at low dose (0.5 MGy)
6ZAW H0SLX7 Damage-free NO-bound copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) determined by serial femtosecond rotation crystallography
6ZAV H0SLX7 NO-bound copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) at 1.19 A resolution (unrestrained, full matrix refinement by SHELX)
6ZAU H0SLX7 Damage-free nitrite-bound copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain) determined by serial femtosecond rotation crystallography
6Z9A Q8A6W4 Fructo-oligosaccharide transporter BT 1762-63
6Z9A Q8A6W3 Fructo-oligosaccharide transporter BT 1762-63
6Z97 P10104 Structure of the prefusion SARS-CoV-2 spike glycoprotein
6Z97 P0DTC2 Structure of the prefusion SARS-CoV-2 spike glycoprotein
6Z8L P04746 Alpha-Amylase in complex with probe fragments
6Z8H Q58NS4 Crystal structure of Variant Surface Glycoprotein VSG13
6Z8G Q58NS4 Crystal structure of VSG13 soaked in 0.5 M used to phase VSG13 to solve the structure.
6Z7P P35828 Composite model of the Caulobacter crescentus S-layer bound to the O-antigen of lipopolysaccharide
6Z7E A0A291L8F4 Variant Surface Glycoprotein VSGsur mutant H122A soaked in 7.7 mM suramin
6Z7D A0A291L8F4 Variant Surface Glycoprotein VSGsur mutant H122A soaked in 0.77 mM Suramin.
6Z7C A0A291L8F4 Variant Surface Glycoprotein VSGsur mutant H122A
6Z7B A0A291L8F4 Variant Surface Glycoprotein VSGsur bound to suramin
6Z7A A0A291L8F4 Variant Surface Glycoprotein VSGsur
6Z79 A0A291L8F4 Variant Surface Glycoprotein VSGsur, I3C ("Magic Triangle") derivative used for phasing of the structure and subsequently as a model for molecular replacement of native, mutants, and drug soaks.
6Z6V P02745 Globular head of C1q in complex with the nanobody C1qNb75
6Z6V P02746 Globular head of C1q in complex with the nanobody C1qNb75
6Z6V P02747 Globular head of C1q in complex with the nanobody C1qNb75
6Z6V 6Z6V Globular head of C1q in complex with the nanobody C1qNb75
6Z62 A0A0S4TLR1 The RSL - sulfonato-calix[8]arene complex, P213 form, TRIS-HCl pH 8.5
6Z60 A0A0S4TLR1 The RSL - sulfonato-calix[8]arene complex, P213 form, CAPS pH 9.5

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: December 9, 2024