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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | December 11, 2024 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 8F2X | P0DTC2 | Crystal structure of antibody WRAIR-2123 in complex with SARS-CoV-2 receptor binding domain | |
| 8KHC | P0DTC2 | SARS-CoV-2 Omicron spike in complex with 5817 Fab | |
| 8KHD | P0DTC2 | The interface structure of Omicron RBD binding to 5817 Fab | |
| 7R40 | P0DTC2 | Structure of the SARS-CoV-2 spike glycoprotein in complex with the 87G7 antibody Fab fragment | |
| 7RQ6 | P0DTC2 | Cryo-EM structure of SARS-CoV-2 spike in complex with non-neutralizing NTD-directed CV3-13 Fab isolated from convalescent individual | |
| 7UB0 | P0DTC2 | SARS-CoV-2 Omicron-BA.2 3-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron-BA.2) | |
| 7UB5 | P0DTC2 | SARS-CoV-2 Omicron-BA.2 3-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron-BA.2) | |
| 7UB6 | P0DTC2 | SARS-CoV-2 Omicron-BA.2 3-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron-BA.2) | |
| 7F5G | P0DTC2 | The crystal structure of RBD-Nanobody complex, DL4 (SA4) | |
| 7MXP | P0DTC2 | Cryo-EM structure of NTD-directed neutralizing antibody LP5 Fab in complex with SARS-CoV-2 S2P spike | |
| 7QDG | P0DTC2 | SARS-CoV-2 S protein S:A222V + S:D614G mutant 1-up | |
| 7QDH | P0DTC2 | SARS-CoV-2 S protein S:D614G mutant 1-up | |
| 7WLY | P0DTC2 | Cryo-EM structure of the Omicron S in complex with 35B5 Fab(1 down- and 2 up RBDs) | |
| 7WLZ | P0DTC2 | Cryo-EM structure of the Omicron S in complex with 35B5 Fab(1 down-, 1 up- and 1 invisible RBDs) | |
| 7Q0A | P0DTC2 | SARS-CoV-2 Spike ectodomain with Fab FI3A | |
| 7Q0A | P0DTC2 | SARS-CoV-2 Spike ectodomain with Fab FI3A | |
| 7TL1 | P0DTC2 | SARS-CoV-2 Omicron 3-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron) | |
| 7TL9 | P0DTC2 | SARS-CoV-2 Omicron 1-RBD up Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron) | |
| 7TP4 | P0DTC2 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody K398.22 | |
| 7WPD | P0DTC2 | SARS-CoV-2 Omicron Variant S Trimer complexed with one JMB2002 Fab | |
| 7WPF | P0DTC2 | SARS-CoV-2 Omicron Variant S Trimer complexed with three JMB2002 Fab | |
| 7WUE | P0DTC2 | Crystal structure of SARS-CoV-2 Receptor Binding Domain in complex with the monoclonal antibody m31A7 | |
| 7C8V | P0DTC2 | Structure of sybody SR4 in complex with the SARS-CoV-2 S Receptor Binding domain (RBD) | |
| 7C8W | P0DTC2 | Structure of sybody MR17 in complex with the SARS-CoV-2 S receptor-binding domain (RBD) | |
| 7CAC | P0DTC2 | SARS-CoV-2 S trimer with one RBD in the open state and complexed with one H014 Fab. | |
| 7CHB | P0DTC2 | Crystal structure of the SARS-CoV-2 RBD in complex with BD-236 Fab | |
| 7CHP | P0DTC2 | Crystal structure of SARS-CoV-2 antibody P5A-3C8 with RBD | |
| 7CWU | P0DTC2 | SARS-CoV-2 spike proteins trimer in complex with P17 and FC05 Fabs cocktail | |
| 7CZR | P0DTC2 | S protein of SARS-CoV-2 in complex bound with P5A-1B8_2B | |
| 7CZW | P0DTC2 | S protein of SARS-CoV-2 in complex bound with P5A-2G7 | |
| 7D2Z | P0DTC2 | Structure of sybody SR31 in complex with the SARS-CoV-2 S Receptor Binding domain (RBD) | |
| 7DX5 | P0DTC2 | S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 2 (1 up RBD and 1 PD bound) | |
| 7E23 | P0DTC2 | SARS-CoV-2 spike in complex with the CA521 neutralizing antibody Fab (focused refinement on Fab-RBD) | |
| 7E39 | P0DTC2 | SARS-CoV-2 spike in complex with the Ab4 neutralizing antibody (State 3) | |
| 7EAM | P0DTC2 | immune complex of SARS-CoV-2 RBD and cross-neutralizing antibody 7D6 | |
| 7EAN | P0DTC2 | immune complex of SARS-CoV-2 RBD and cross-neutralizing antibody 6D6 | |
| 7EJ5 | P0DTC2 | Cryo-EM structure of SARS-CoV-2 spike in complex with a neutralizing antibody RBD-chAb-45 | |
| 7EY4 | P0DTC2 | Local CryoEM of the SARS-CoV-2 S6PV2 in complex with BD-667 | |
| 7FDI | P0DTC2 | SARS-COV-2 Spike RBDMACSp36 binding to hACE2 | |
| 7KE7 | P0DTC2 | SARS-CoV-2 D614G 3-RBD-down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-D614G Sub-Classification) | |
| 7KJ4 | P0DTC2 | SARS-CoV-2 Spike Glycoprotein with three ACE2 Bound | |
| 7LCN | P0DTC2 | Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1050.1 | |
| 7M6D | P0DTC2 | Structure of the SARS-CoV-2 RBD in complex with neutralizing antibodies BG4-25 and CR3022 | |
| 7M71 | P0DTC2 | SARS-CoV-2 Spike:5A6 Fab complex I focused refinement | |
| 7MJI | P0DTC2 | Cryo-EM structure of the SARS-CoV-2 N501Y mutant spike protein ectodomain bound to VH ab8 (focused refinement of RBD and VH ab8) | |
| 7MJJ | P0DTC2 | Cryo-EM structure of the SARS-CoV-2 N501Y mutant spike protein ectodomain bound to Fab ab1 (class 1) | |
| 7MJL | P0DTC2 | Cryo-EM structure of the SARS-CoV-2 N501Y mutant spike protein ectodomain bound to Fab ab1 (focused refinement of RBD and Fab ab1) | |
| 7MKM | P0DTC2 | SARS-CoV-2 Spike RBD in complex with neutralizing Fab SARS2-38 (local refinement) | |
| 7MTC | P0DTC2 | Structure of freshly purified SARS-CoV-2 S2P spike at pH 7.4 | |
| 7MY2 | P0DTC2 | CryoEM structure of neutralizing nanobody Nb30 in complex with SARS-CoV2 spike |
