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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | December 11, 2024 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 7WG7 | P0DTC2 | Acidic Omicron Spike Trimer | |
| 7WG8 | P0DTC2 | Delta Spike Trimer(3 RBD Down) | |
| 7WG9 | P0DTC2 | Delta Spike Trimer(1 RBD Up) | |
| 7WGB | P0DTC2 | Neutral Omicron Spike Trimer in complex with ACE2 | |
| 7WGC | P0DTC2 | Neutral Omicron Spike Trimer in complex with ACE2. | |
| 7WHZ | P0DTC2 | SARS-CoV-2 spike protein in complex with three human neutralizing antibodies | |
| 7WI0 | P0DTC2 | SARS-CoV-2 Omicron variant spike in complex with three human neutralizing antibodies | |
| 7WR8 | P0DTC2 | Local CryoEM structure of the SARS-CoV-2 S6P(B.1.1.529) in complex with BD55-3152 Fab | |
| 7WRZ | P0DTC2 | Local resolution of BD55-5840 Fab and SARS-COV2 Omicron RBD | |
| 7FAE | P0DTC2 | S protein of SARS-CoV-2 in complex bound with P36-5D2(state2) | |
| 7Q0G | P0DTC2 | Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-49 and FI-3A Fabs | |
| 7Q0H | P0DTC2 | Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-50 and Beta-54 | |
| 7Q0I | P0DTC2 | Crystal structure of the N-terminal domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-43 | |
| 7SBK | P0DTC2 | Closed state of pre-fusion SARS-CoV-2 Delta variant spike protein | |
| 7SBL | P0DTC2 | One RBD-up 1 of pre-fusion SARS-CoV-2 Delta variant spike protein | |
| 7SBO | P0DTC2 | One RBD-up 2 of pre-fusion SARS-CoV-2 Delta variant spike protein | |
| 7SBP | P0DTC2 | Closed state of pre-fusion SARS-CoV-2 Kappa variant spike protein | |
| 7SBQ | P0DTC2 | One RBD-up 1 of pre-fusion SARS-CoV-2 Kappa variant spike protein | |
| 7SBR | P0DTC2 | One RBD-up 2 of pre-fusion SARS-CoV-2 Kappa variant spike protein | |
| 7SBS | P0DTC2 | One RBD-up 1 of pre-fusion SARS-CoV-2 Gamma variant spike protein | |
| 7SBT | P0DTC2 | One RBD-up 2 of pre-fusion SARS-CoV-2 Gamma variant spike protein | |
| 7DQA | P0DTC2 | Cryo-EM structure of SARS-CoV2 RBD-ACE2 complex | |
| 7K9I | P0DTC2 | SARS-CoV-2 Spike RBD in complex with neutralizing Fab 2B04 (local refinement) | |
| 7SXR | P0DTC2 | Cryo-EM structure of the SARS-CoV-2 D614G mutant spike protein ectodomain | |
| 7SY3 | P0DTC2 | Cryo-EM structure of the SARS-CoV-2 D614G,N501Y,E484K mutant spike protein ectodomain bound to human ACE2 ectodomain (global refinement) | |
| 7T9L | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Omicron spike protein in complex with human ACE2 (focused refinement of RBD and ACE2) | |
| 7V77 | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Beta variant (B.1.351), uncleavable form, two RBD-up conformation | |
| 7V7D | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Kappa variant (B.1.617.1), all RBD-down conformation | |
| 7V7V | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), two RBD-up conformation 3 | |
| 7V7Z | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Beta variant (B.1.351) in complex with Angiotensin-converting enzyme 2 (ACE2) ectodomain, three ACE2-bound form | |
| 6M17 | P0DTC2 | The 2019-nCoV RBD/ACE2-B0AT1 complex | |
| 6VYB | P0DTC2 | SARS-CoV-2 spike ectodomain structure (open state) | |
| 6WPT | P0DTC2 | Structure of the SARS-CoV-2 spike glycoprotein in complex with the S309 neutralizing antibody Fab fragment (open state) | |
| 6WPT | P0DTC2 | Structure of the SARS-CoV-2 spike glycoprotein in complex with the S309 neutralizing antibody Fab fragment (open state) | |
| 6XF6 | P0DTC2 | Cryo-EM structure of a biotinylated SARS-CoV-2 spike probe in the prefusion state (1 RBD up) | |
| 6ZP0 | P0DTC2 | Structure of SARS-CoV-2 Spike Protein Trimer (single Arg S1/S2 cleavage site) in Closed State | |
| 7A29 | P0DTC2 | Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing sybodies (Sb23) 2-up conformation | |
| 7A91 | P0DTC2 | Dissociated S1 domain of SARS-CoV-2 Spike bound to ACE2 (Non-Uniform Refinement) | |
| 7B14 | P0DTC2 | Nanobody E bound to Spike-RBD in a localized reconstruction | |
| 7B18 | P0DTC2 | SARS-CoV-spike bound to two neutralising nanobodies | |
| 7B3O | P0DTC2 | Crystal structure of the SARS-CoV-2 RBD in complex with STE90-C11 Fab | |
| 7CYV | P0DTC2 | Crystal structure of FD20, a neutralizing single-chain variable fragment (scFv) in complex with SARS-CoV-2 Spike receptor-binding domain (RBD) | |
| 7CZZ | P0DTC2 | S protein of SARS-CoV-2 in complex bound with P5A-2F11_3B | |
| 7DPM | P0DTC2 | Crystal structure of SARS-CoV-2 Spike RBD in complex with MW06 Fab | |
| 7DX1 | P0DTC2 | S protein of SARS-CoV-2 D614G mutant | |
| 7DX6 | P0DTC2 | S protein of SARS-CoV-2 bound with PD of ACE2 in the conformation 3 (2 up RBD and 1 PD bound) | |
| 7E3C | P0DTC2 | SARS-CoV-2 spike in complex with the Ab1 neutralizing antibody (focused refinement on Fab-RBD) | |
| 7EB4 | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Spike D614G variant, two RBD-up conformation 1 | |
| 7EDH | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-UK variant (B.1.1.7), one RBD-up conformation 3 | |
| 7FDH | P0DTC2 | SARS-COV-2 Spike RBDMACSp25 binding to hACE2 |
