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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | December 11, 2024 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 8OYT | P0DTC2 | Stabilised BA.1 SARS-CoV-2 spike with H6 nanobodies in '3 up' RBD conformation | |
| 8ZHD | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with two R1-26 Fabs | |
| 8ZHD | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with two R1-26 Fabs | |
| 8ZHE | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three R1-26 Fabs | |
| 8ZHE | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three R1-26 Fabs | |
| 8ZHF | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with R1-26 Fab, head-to-head aggregate | |
| 8ZHF | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with R1-26 Fab, head-to-head aggregate | |
| 8ZHG | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with R1-26 Fab, focused refinement of RBD-Fab region | |
| 8ZHG | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with R1-26 Fab, focused refinement of RBD-Fab region | |
| 8ZHH | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with two H18 Fabs | |
| 8ZHH | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with two H18 Fabs | |
| 8ZHI | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs | |
| 8ZHI | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs | |
| 8ZHJ | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs, head-to-head aggregate (C1 symmetry) | |
| 8ZHJ | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs, head-to-head aggregate (C1 symmetry) | |
| 8ZHK | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs, head-to-head aggregate (C3 symmetry) | |
| 8ZHK | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three H18 Fabs, head-to-head aggregate (C3 symmetry) | |
| 8ZHL | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with two H18 and two R1-32 Fabs | |
| 8ZHL | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with two H18 and two R1-32 Fabs | |
| 8ZHM | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three H18 and three R1-32 Fabs | |
| 8ZHM | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three H18 and three R1-32 Fabs | |
| 8ZHN | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three H18 and three R1-32 Fabs (one RBD rotated) | |
| 8ZHN | P0DTC2 | SARS-CoV-2 spike trimer (6P) in complex with three H18 and three R1-32 Fabs (one RBD rotated) | |
| 8ZHO | P0DTC2 | SARS-CoV-2 S1 in complex with H18 and R1-32 Fab | |
| 8ZHP | P0DTC2 | Dimer of SARS-CoV-2 S1 in complex with H18 and R1-32 Fabs | |
| 9F9Y | P0DTC2 | SARS-CoV-2 BA-2.87.1 Spike ectodomain | |
| 8WPW | P0DTC2 | Cryo-EM structure of SARS-CoV-2 XBB.1.5 receptor-binding domain (RBD) complexed with CB6 mutant,S309, and S304 antibodies | |
| 8WPY | P0DTC2 | Cryo-EM structure of SARS-CoV-2 receptor-binding domain (RBD) complexed with CB6 mutant,S309, and S304 antibodies | |
| 9ASD | P0DTC2 | VIR-7229 Fab fragment bound the SARS-CoV-2 BA.2.86 spike trimer (local refinement of the BA 2.86 RBD/VIR-7229 VHVL) | |
| 9AU2 | P0DTC2 | VIR-7229 Fab fragment bound the BA.2.86 spike trimer (global refinement) | |
| 9CO8 | P0DTC2 | JN.1 spike/Nanosota-9 complex | |
| 8USZ | P0DTC2 | Cryo-EM Structure of Full-Length Spike Protein of Omicron XBB.1.5 | |
| 7E5R | P0DTC2 | SARS-CoV-2 S trimer with three-antibody cocktail complex | |
| 7KN4 | P0DTC2 | Crystal structure of SARS-CoV-2 spike protein receptor-binding domain complexed with a pre-pandemic antibody S-E6 Fab | |
| 7MZI | P0DTC2 | SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 | |
| 7RKV | P0DTC2 | Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C118 (State 1) | |
| 7RXD | P0DTC2 | CryoEM structure of RBD domain of COVID-19 in complex with Legobody | |
| 7SOB | P0DTC2 | SARS-CoV-2 S B.1.617.1 kappa variant + S309 + S2L20 Global Refinement | |
| 7V78 | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1), one RBD-up conformation 1 | |
| 7V7O | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), one RBD-up conformation 1 | |
| 7V7S | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), one RBD-up conformation 5 | |
| 7V7T | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), two RBD-up conformation 1 | |
| 7V80 | P0DTC2 | Local refinement of SARS-CoV-2 S-Beta variant (B.1.351) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain | |
| 7TEI | P0DTC2 | SARS-CoV-2 Omicron 1-RBD up Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron) | |
| 7TF8 | P0DTC2 | SARS-CoV-2 Omicron 3-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron) | |
| 7THE | P0DTC2 | Structure of RBD directed antibody DH1042 in complex with SARS-CoV-2 spike: Local refinement of RBD-Fab interface | |
| 7THT | P0DTC2 | CryoEM structure of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1042 | |
| 7TNW | P0DTC2 | Structural and functional impact by SARS-CoV-2 Omicron spike mutations | |
| 7TO4 | P0DTC2 | Structural and functional impact by SARS-CoV-2 Omicron spike mutations | |
| 7WZ1 | P0DTC2 | SARS-CoV-2 Omicron Spike trimer |
