Table Filtering
Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | April 23, 2025 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 7MZI | P0DTC2 | SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 | |
| 7RKV | P0DTC2 | Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C118 (State 1) | |
| 7RXD | P0DTC2 | CryoEM structure of RBD domain of COVID-19 in complex with Legobody | |
| 7SOB | P0DTC2 | SARS-CoV-2 S B.1.617.1 kappa variant + S309 + S2L20 Global Refinement | |
| 7V78 | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Gamma variant (P.1), one RBD-up conformation 1 | |
| 7V7O | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), one RBD-up conformation 1 | |
| 7V7S | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), one RBD-up conformation 5 | |
| 7V7T | P0DTC2 | Cryo-EM structure of SARS-CoV-2 S-Delta variant (B.1.617.2), two RBD-up conformation 1 | |
| 7V80 | P0DTC2 | Local refinement of SARS-CoV-2 S-Beta variant (B.1.351) RBD and Angiotensin-converting enzyme 2 (ACE2) ectodomain | |
| 7TEI | P0DTC2 | SARS-CoV-2 Omicron 1-RBD up Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron) | |
| 7TF8 | P0DTC2 | SARS-CoV-2 Omicron 3-RBD down Spike Protein Trimer without the P986-P987 stabilizing mutations (S-GSAS-Omicron) | |
| 7THE | P0DTC2 | Structure of RBD directed antibody DH1042 in complex with SARS-CoV-2 spike: Local refinement of RBD-Fab interface | |
| 7THT | P0DTC2 | CryoEM structure of SARS-CoV-2 S protein in complex with Receptor Binding Domain antibody DH1042 | |
| 7TNW | P0DTC2 | Structural and functional impact by SARS-CoV-2 Omicron spike mutations | |
| 7TO4 | P0DTC2 | Structural and functional impact by SARS-CoV-2 Omicron spike mutations | |
| 7WZ1 | P0DTC2 | SARS-CoV-2 Omicron Spike trimer | |
| 7W8S | P0DTC2 | Structure of SARS-CoV-2 spike receptor-binding domain Y453F mutation complexed with American mink ACE2 | |
| 7WM0 | P0DTC2 | Cryo-EM structure of the Omicron RBD in complex with 35B5 Fab( local refinement of the RBD and 35B5 Fab) | |
| 7X7T | P0DTC2 | Cryo-EM structure of SARS-CoV-2 spike protein in complex with three nAbs X01, X10 and X17 | |
| 7X7U | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Delta variant spike protein in complex with three nAbs X01, X10 and X17 | |
| 7ZBU | P0DTC2 | CryoEM structure of SARS-CoV-2 spike monomer in complex with neutralising antibody P008_60 | |
| 8DLO | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Gamma (P.1) spike protein | |
| 8DLP | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Gamma (P.1) spike protein in complex with human ACE2 | |
| 8DLQ | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Gamma (P.1) spike protein in complex with human ACE2 (focused refinement of RBD and ACE2) | |
| 8DLR | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Gamma (P.1) spike protein in complex with Fab 4-8 (focused refinement of NTD and 4-8) | |
| 7WBH | P0DTC2 | overall structure of hu33 and spike | |
| 7S83 | P0DTC2 | Crystal structure of SARS CoV-2 Spike Receptor Binding Domain in complex with shark neutralizing VNARs ShAb01 and ShAb02 | |
| 7SWW | P0DTC2 | SARS-CoV-2 Spike NTD in complex with neutralizing Fab SARS2-57 (local refinement) | |
| 7SWX | P0DTC2 | SARS-CoV-2 Spike in complex with neutralizing Fab SARS2-57 (three down conformation) | |
| 7U9O | P0DTC2 | SARS-CoV-2 spike trimer RBD in complex with Fab NE12 | |
| 7U9P | P0DTC2 | SARS-CoV-2 spike trimer RBD in complex with Fab NA8 | |
| 7XMX | P0DTC2 | Cryo-EM structure of SARS-CoV-2 spike glycoprotein in complex with three F61 Fab | |
| 7XMZ | P0DTC2 | Cryo-EM structure of SARS-CoV-2 spike glycoprotein in complex with three D2 Fab | |
| 7XST | P0DTC2 | Cryo-EM structure of SARS-CoV-2 Omicron spike glycoprotein in complex with three F61 Fab and three D2 Fab | |
| 8BH5 | P0DTC2 | SARS-CoV-2 BA.2.12.1 RBD in complex with Beta-27 Fab and C1 nanobody | |
| 8HHX | P0DTC2 | SARS-CoV-2 Delta Spike in complex with FP-12A | |
| 8HHY | P0DTC2 | SARS-CoV-2 Delta Spike in complex with IS-9A | |
| 7UL0 | P0DTC2 | Crystal structure of SARS-CoV-2 RBD in complex with the ridge-binding nAb EH8 isolated from a nonvaccinated pediatric patient | |
| 7UL1 | P0DTC2 | Crystal structure of SARS-CoV-2 RBD in complex with the neutralizing IGHV3-53-encoded antibody EH3 isolated from a nonvaccinated pediatric patient | |
| 7WP8 | P0DTC2 | Cryo-EM structure of SARS-CoV-2 recombinant spike protein STFK1628x in complex with three neutralizing antibodies | |
| 7ZRV | P0DTC2 | cryo-EM structure of omicron spike in complex with de novo designed binder, full map | |
| 8BEV | P0DTC2 | Cryo-EM structure of SARS-CoV-2 spike (HexaPro variant) in complex with nanobody W25 (map 3, focus refinement on RBD, W25 and adjacent NTD) | |
| 8BGG | P0DTC2 | Cryo-EM structure of SARS-CoV-2 spike (Omicron BA.1 variant) in complex with nanobody W25 (map 5, focus refinement on RBD, W25 and adjacent NTD) | |
| 8AQW | P0DTC2 | BA.4/5 SARS-CoV-2 Spike bound to mouse ACE2 (local) | |
| 7X93 | P0DTC2 | The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab765 | |
| 7X94 | P0DTC2 | The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab712 | |
| 7X95 | P0DTC2 | The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab709 | |
| 7X96 | P0DTC2 | The SARS-CoV-2 receptor binding domain bound with the Fab fragment of a human neutralizing antibody Ab847 | |
| 8C3V | P0DTC2 | SARS-CoV-2 Delta-RBD complexed with BA.2-13 Fab and C1 nanobody | |
| 8D0Z | P0DTC2 | S728-1157 IgG in complex with SARS-CoV-2-6P-Mut7 Spike protein (focused refinement) |
