GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
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GlycoNAVI Proteins | November 21, 2024 |
PDB ID | UniProt ID | Title | Descriptor ▼ |
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5NET | Q80B23 | Localised Reconstruction of Integrin alpha V beta 6 bound to Foot and Mouth Disease Virus O1 Manisa - Pose A. | O1 Manisa VP1, O1 Manisa VP2, O1 Manisa VP3, O1 Manisa VP4, Integrin alpha-V, Integrin beta-6 |
5NET | E1ACS1 | Localised Reconstruction of Integrin alpha V beta 6 bound to Foot and Mouth Disease Virus O1 Manisa - Pose A. | O1 Manisa VP1, O1 Manisa VP2, O1 Manisa VP3, O1 Manisa VP4, Integrin alpha-V, Integrin beta-6 |
5NET | P06756 | Localised Reconstruction of Integrin alpha V beta 6 bound to Foot and Mouth Disease Virus O1 Manisa - Pose A. | O1 Manisa VP1, O1 Manisa VP2, O1 Manisa VP3, O1 Manisa VP4, Integrin alpha-V, Integrin beta-6 |
5NET | P18564 | Localised Reconstruction of Integrin alpha V beta 6 bound to Foot and Mouth Disease Virus O1 Manisa - Pose A. | O1 Manisa VP1, O1 Manisa VP2, O1 Manisa VP3, O1 Manisa VP4, Integrin alpha-V, Integrin beta-6 |
5F84 | Q8T045 | Crystal structure of Drosophila Poglut1 (Rumi) complexed with its glycoprotein product (glucosylated EGF repeat) and UDP | O-glucosyltransferase rumi (E.C.2.4.1.-), Coagulation factor IX (E.C.3.4.21.22) |
5F84 | P00740 | Crystal structure of Drosophila Poglut1 (Rumi) complexed with its glycoprotein product (glucosylated EGF repeat) and UDP | O-glucosyltransferase rumi (E.C.2.4.1.-), Coagulation factor IX (E.C.3.4.21.22) |
2YDQ | Q0TR53 | CpOGA D298N in complex with hOGA-derived O-GlcNAc peptide | O-GLCNACASE NAGJ (E.C.3.2.1.52), BIFUNCTIONAL PROTEIN NCOAT (E.C.3.2.1.169) |
2YDQ | O60502 | CpOGA D298N in complex with hOGA-derived O-GlcNAc peptide | O-GLCNACASE NAGJ (E.C.3.2.1.52), BIFUNCTIONAL PROTEIN NCOAT (E.C.3.2.1.169) |
5NEM | A0A1B0SZV3 | Localised reconstruction of alpha v beta 6 bound to Foot and Mouth Disease Virus O PanAsia - Pose A. | O PanAsia VP1, Capsid protein, O PanAsia VP3, O PanAsia VP4, Integrin alpha-V, Integrin beta-6 |
5NEM | J3T9N5 | Localised reconstruction of alpha v beta 6 bound to Foot and Mouth Disease Virus O PanAsia - Pose A. | O PanAsia VP1, Capsid protein, O PanAsia VP3, O PanAsia VP4, Integrin alpha-V, Integrin beta-6 |
5NEM | A6Y878 | Localised reconstruction of alpha v beta 6 bound to Foot and Mouth Disease Virus O PanAsia - Pose A. | O PanAsia VP1, Capsid protein, O PanAsia VP3, O PanAsia VP4, Integrin alpha-V, Integrin beta-6 |
5NEM | P06756 | Localised reconstruction of alpha v beta 6 bound to Foot and Mouth Disease Virus O PanAsia - Pose A. | O PanAsia VP1, Capsid protein, O PanAsia VP3, O PanAsia VP4, Integrin alpha-V, Integrin beta-6 |
5NEM | P18564 | Localised reconstruction of alpha v beta 6 bound to Foot and Mouth Disease Virus O PanAsia - Pose A. | O PanAsia VP1, Capsid protein, O PanAsia VP3, O PanAsia VP4, Integrin alpha-V, Integrin beta-6 |
4WBH | Q6P988 | STRUCTURE OF THE WNT DEACYLASE NOTUM - CRYSTAL FORM I APO - 2.2A | Notum |
4XL1 | Q07008 | Complex of Notch1 (EGF11-13) bound to Delta-like 4 (N-EGF1) | Notch1, Dll4 |
4XL1 | D3ZHH1 | Complex of Notch1 (EGF11-13) bound to Delta-like 4 (N-EGF1) | Notch1, Dll4 |
4XLW | Q07008 | Complex of Notch1 (EGF11-13) bound to Delta-like 4 (N-EGF2) | Notch1 EGF11-13, Delta-like 4 (N-EGF2) |
4XLW | D3ZHH1 | Complex of Notch1 (EGF11-13) bound to Delta-like 4 (N-EGF2) | Notch1 EGF11-13, Delta-like 4 (N-EGF2) |
4OH3 | Q05085 | Crystal structure of a nitrate transporter | Nitrate transporter 1.1 |
5JNX | O15118 | The 6.6 A cryo-EM structure of the full-length human NPC1 in complex with the cleaved glycoprotein of Ebola virus | Niemann-Pick C1 protein, Envelope glycoprotein |
5JNX | P87666 | The 6.6 A cryo-EM structure of the full-length human NPC1 in complex with the cleaved glycoprotein of Ebola virus | Niemann-Pick C1 protein, Envelope glycoprotein |
5U73 | O15118 | Crystal structure of human Niemann-Pick C1 protein | Niemann-Pick C1 protein |
3JD8 | O15118 | cryo-EM structure of the full-length human NPC1 at 4.4 angstrom | Niemann-Pick C1 protein |
5HNS | O15118 | Structure of glycosylated NPC1 luminal domain C | Niemann-Pick C1 protein |
4QTN | D2ZZC1 | Crystal structure of the Vitamin B3 transporter PnuC | Nicotinamide riboside transporter PnuC |
6IDF | Q92542 | Cryo-EM structure of gamma secretase in complex with a Notch fragment | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Notch1 |
6IDF | P49768 | Cryo-EM structure of gamma secretase in complex with a Notch fragment | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Notch1 |
6IDF | Q96BI3 | Cryo-EM structure of gamma secretase in complex with a Notch fragment | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Notch1 |
6IDF | Q9NZ42 | Cryo-EM structure of gamma secretase in complex with a Notch fragment | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Notch1 |
6IDF | 6IDF | Cryo-EM structure of gamma secretase in complex with a Notch fragment | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Notch1 |
6IYC | Q92542 | Recognition of the Amyloid Precursor Protein by Human gamma-secretase | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Amyloid-beta A4 protein |
6IYC | P49768 | Recognition of the Amyloid Precursor Protein by Human gamma-secretase | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Amyloid-beta A4 protein |
6IYC | Q96BI3 | Recognition of the Amyloid Precursor Protein by Human gamma-secretase | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Amyloid-beta A4 protein |
6IYC | Q9NZ42 | Recognition of the Amyloid Precursor Protein by Human gamma-secretase | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Amyloid-beta A4 protein |
6IYC | P05067 | Recognition of the Amyloid Precursor Protein by Human gamma-secretase | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2, Amyloid-beta A4 protein |
6LQG | Q92542 | Human gamma-secretase in complex with small molecule Avagacestat | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
6LQG | P49768 | Human gamma-secretase in complex with small molecule Avagacestat | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
6LQG | Q96BI3 | Human gamma-secretase in complex with small molecule Avagacestat | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
6LQG | Q9NZ42 | Human gamma-secretase in complex with small molecule Avagacestat | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
6LR4 | Q92542 | Molecular basis for inhibition of human gamma-secretase by small molecule | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
6LR4 | P49768 | Molecular basis for inhibition of human gamma-secretase by small molecule | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
6LR4 | Q96BI3 | Molecular basis for inhibition of human gamma-secretase by small molecule | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
6LR4 | Q9NZ42 | Molecular basis for inhibition of human gamma-secretase by small molecule | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
7C9I | Q92542 | Human gamma-secretase in complex with small molecule L-685,458 | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
7C9I | P49768 | Human gamma-secretase in complex with small molecule L-685,458 | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
7C9I | Q96BI3 | Human gamma-secretase in complex with small molecule L-685,458 | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
7C9I | Q9NZ42 | Human gamma-secretase in complex with small molecule L-685,458 | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
7D8X | Q92542 | CryoEM structure of human gamma-secretase in complex with E2012 and L685458 | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
7D8X | P49768 | CryoEM structure of human gamma-secretase in complex with E2012 and L685458 | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
7D8X | Q96BI3 | CryoEM structure of human gamma-secretase in complex with E2012 and L685458 | Nicastrin, Presenilin-1 (E.C.3.4.23.-), Gamma-secretase subunit APH-1A, Gamma-secretase subunit PEN-2 |
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: August 19, 2024