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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | November 21, 2024 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 6MU7 | 6MU7 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-818251 in Complex with Human Antibodies 3H109L and 35O22 at 3.1 Angstrom | Envelope glycoprotein gp160, 35O22 scFv heavy chain portion, 35O22 scFv light chain portion, 3H109L Fab heavy chain, 3H109L Fab light chain |
| 6MU8 | 6MU8 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-386150 in Complex with Human Antibodies 3H109L and 35O22 at 3.5 Angstrom | Envelope glycoprotein gp160, 35O22 scFv heavy chain portion, 35O22 scFv light chain portion, 3H109L Fab heavy chain, 3H109L Fab light chain |
| 6MUB | 6MUB | Anti-HIV-1 Fab 2G12 + Man5 re-refinement | |
| 6MUB | 6MUB | Anti-HIV-1 Fab 2G12 + Man5 re-refinement | |
| 6MUF | 6MUF | Crystal Structure of HIV-1 B41 SOSIP.664 Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.4 Angstrom | Envelope glycoprotein gp160, 35O22 scFv heavy chain portion, 35O22 scFv light chain portion, 3H109L Fab heavy chain, 3H109L Fab light chain |
| 6MUG | 6MUG | Crystal Structure of HIV-1 B41 SOSIP.664 Prefusion Env Trimer Bound to Small Molecule HIV-1 Entry Inhibitor BMS-386150 in Complex with Human Antibodies 3H109L and 35O22 at 3.8 Angstrom | Envelope glycoprotein gp160, 35O22 scFv heavy chain portion, 35O22 scFv light chain portion, 3H109L Fab heavy chain, 3H109L Fab light chain |
| 6MVL | 6MVL | Crystal structure of VISTA bound to a pH-selective antibody Fab fragment | V-type immunoglobulin domain-containing suppressor of T-cell activation, Antibody Fab fragment heavy chain, Antibody Fab fragment light chain |
| 6MWR | 6MWR | Recognition of MHC-like molecule | |
| 6MYA | 6MYA | Crystal structure of InvbP.18715.a.KN11: Influenza hemagglutinin from strain A/Almaty/32/1998 | |
| 6MYV | 6MYV | Sialidase26 co-crystallized with DANA-Gc | |
| 6MYY | 6MYY | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MYY | 6MYY | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MZJ | 6MZJ | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MZJ | 6MZJ | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6N1V | 6N1V | Cryo-EM structure at 4.0 A resolution of vaccine-elicited antibody A12V163-a.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | 17D4 Heavy chain, 17D4 Light chain, Envelope glycoprotein gp120, Envelope glycoprotein gp41, PGT122 Heavy chain, PGT122 Light chain, VRC03 Heavy chain, VRC03 Light chain |
| 6N1W | 6N1W | Cryo-EM structure at 4.2 A resolution of vaccine-elicited antibody DFPH-a.15 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | Envelope glycoprotein gp120, DFPH-a.15 heavy chain, DFPH-a.15 Light chain, Envelope glycoprotein gp41, PGT122 Light chain, PGT122 Heavy chain, VRC03 Light chain, VRC03 Heavy chain |
| 6N2X | 6N2X | Anti-HIV-1 Fab 2G12 + Man9 re-refinement | |
| 6N2X | 6N2X | Anti-HIV-1 Fab 2G12 + Man9 re-refinement | |
| 6N35 | 6N35 | Anti-HIV-1 Fab 2G12 + Man1-2 re-refinement | |
| 6N35 | 6N35 | Anti-HIV-1 Fab 2G12 + Man1-2 re-refinement | |
| 6N4Y | 6N4Y | Metabotropic Glutamate Receptor 5 Extracellular Domain with Nb43 | |
| 6N50 | 6N50 | Metabotropic Glutamate Receptor 5 Extracellular Domain in Complex with Nb43 and L-quisqualic acid | |
| 6N51 | 6N51 | Metabotropic Glutamate Receptor 5 bound to L-quisqualate and Nb43 | Metabotropic glutamate receptor 5, Nanobody 43 |
| 6N5B | 6N5B | Broadly protective antibodies directed to a subdominant influenza hemagglutinin epitope | antibody heavy chain, antibody light chain, Hemagglutinin |
| 6N5E | 6N5E | Broadly protective antibodies directed to a subdominant influenza hemagglutinin epitope | |
| 6N6B | 6N6B | The complex crystal structure of neuraminidase from A/Minnesota/11/2010 with B10 antibody. | Neuraminidase (E.C.3.2.1.18), B10 antibody Heavy Chain Fab, B10 antibody Light Chain Fab |
| 6N9T | 6N9T | Structure of a peptide-based photo-affinity cross-linker with Herceptin Fc | Immunoglobulin G1 FC, Photo-affinity peptide |
| 6NAE | 6NAE | Crystal Structure of Ebola zaire GP protein with bound ARN0074898 | |
| 6NAE | 6NAE | Crystal Structure of Ebola zaire GP protein with bound ARN0074898 | |
| 6NB3 | 6NB3 | MERS-CoV complex with human neutralizing LCA60 antibody Fab fragment (state 1) | Spike glycoprotein, LCA60 light chain, LCA60 heavy chain |
| 6NB4 | 6NB4 | MERS-CoV S complex with human neutralizing LCA60 antibody Fab fragment (state 2) | Spike glycoprotein, LCA60 heavy chain, LCA60 light chain |
| 6NB6 | 6NB6 | SARS-CoV complex with human neutralizing S230 antibody Fab fragment (state 1) | Spike glycoprotein, S230 heavy chain, S230 light chain |
| 6NB7 | 6NB7 | SARS-CoV complex with human neutralizing S230 antibody Fab fragment (state 2) | Spike glycoprotein, S230 heavy chain, S230 light chain |
| 6NC2 | 6NC2 | AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody ACS202 fragment antigen binding | AMC011 v4.2 SOSIP gp120, AMC011 v4.2 SOSIP gp41, Monoclonal antibody ACS202 fragment antigen binding heavy chain, Monoclonal antibody ACS202 fragment antigen binding kappa chain |
| 6NC3 | 6NC3 | AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody VRC34 fragment antigen binding | HIV-1 Env AMC011 v4.2 SOSIP gp120, HIV-1 Env AMC011 v4.2 SOSIP gp41, Monoclonal antibody VRC34.01 fragment antigen binding heavy chain, Monoclonal antibody VRC34.01 fragment antigen binding light chain |
| 6NE1 | 6NE1 | Designed repeat protein in complex with Fz4 | |
| 6NE2 | 6NE2 | Designed repeat protein in complex with Fz7 | |
| 6NF2 | 6NF2 | Cryo-EM structure of vaccine-elicited antibody 0PV-c.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | Envelope glycoprotein gp120, Envelope glycoprotein gp41, VRC03 Heavy Chain, VRC03 Light Chain, PGT122 Heavy Chain, PGT122 Light Chain, 0PV-c.01 Heavy Chain, 0PV-c.01 Light Chain |
| 6NF5 | 6NF5 | BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP1 fragmentantigen binding and base-binding RM20A3 fragment antigen binding | HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp120, HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp41, BG18-like precursor HMP1 fragment antigen binding heavy chain, V2-17 protein, base-binding RM20A3 fragment antigen binding heavy chain, base-binding RM20A3 fragment antigen binding light chain |
| 6NFC | 6NFC | BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP42 fragmentantigen binding and base-binding RM20A3 fragment antigen binding | base-binding RM20A3 fragment antigen binding heavy chain, base-binding RM20A3 fragment antigen binding light chain, HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp120, HIV-1 Env BG505 MD64 N332-GT5 SOSIP gp41, BG18-like precursor HMP42 fragment antigen binding heavy chain, BG18-like precursor HMP42 fragment antigen binding light chain |
| 6NIJ | 6NIJ | PGT145 Fab in complex with full length AMC011 HIV-1 Env | |
| 6NIX | 6NIX | Crystal structure of Immune Receptor | |
| 6NJL | 6NJL | Architecture and subunit arrangement of native AMPA receptors | Glutamate receptor 1, Glutamate receptor 2, A'/C' auxiliary proteins, Voltage-dependent calcium channel gamma-2 subunit, 11B8 scFv, 15F1 Fab light chain, 15F1 Fab heavy chain |
| 6NJM | 6NJM | Architecture and subunit arrangement of native AMPA receptors | Glutamate receptor 3, Glutamate receptor 2, A'-C' auxiliary proteins, Voltage-dependent calcium channel gamma-2 subunit, 5B2 Fab Light Chain, 5B2 Fab Heavy Chain, 15F1 Fab light chain, 15F1 Fab heavy chain |
| 6NJN | 6NJN | Architecture and subunit arrangement of native AMPA receptors | Glutamate receptor 1, Glutamate receptor 2, Glutamate receptor 3, A'-C' auxiliary proteins, Voltage-dependent calcium channel gamma-2 subunit, 11B8 scFv, 15F1 Fab light chain, 15F1 Fab heavy chain, 5B2 Fab |
| 6NM6 | 6NM6 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to N6 FR3-03 scFv in Complex with Crystallization Chaperones 3H109L Fab and 35O22 scFv at 3.2 Angstrom | Envelope glycoprotein gp41, 35O22 scFv heavy chain, 35O22 scFv light chain, Envelope glycoprotein gp120, 3H109L Fab heavy chain, 3H109L Fab light chain, N6 FR3-03 heavy chain, N6 FR3-03 light chain |
| 6NNF | 6NNF | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to VRC01 FR3-03 scFv in Complex with Crystallization Chaperones 3H109L Fab and 35O22 scFv at 3.5 Angstrom | |
| 6NNJ | 6NNJ | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to CH31 scFv in Complex with Crystallization Chaperones 3H109L Fab and 35O22 scFv at 3.1 Angstrom | Envelope glycoprotein gp41, 35O22 scFv heavy chain, 35O22 scFv light chain, Envelope glycoprotein gp120, 3H109L Fab heavy chain, 3H109L Fab light chain, N6 FR3-03 heavy chain, N6 FR3-03 light chain |
| 6NQD | 6NQD | Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 Fab | T/F100 Env gp120, T/F100 Env gp41, 8ANC195 G52K5 heavy chain, IG gamma-1 chain,8ANC195 G52K5 light chain |
| 6NQD | 6NQD | Cryo-EM structure of T/F100 SOSIP.664 HIV-1 Env trimer in complex with 8ANC195 Fab | T/F100 Env gp120, T/F100 Env gp41, 8ANC195 G52K5 heavy chain, IG gamma-1 chain,8ANC195 G52K5 light chain |
