GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | January 14, 2026 |
| PDB ID | UniProt ID | Title | Descriptor ▲ |
|---|---|---|---|
| 4D4B | Q9Z4P9 | The catalytic domain, BcGH76, of Bacillus circulans Aman6 in complex with MSMSMe | ALPHA-1,6-MANNANASE (E.C.3.2.1.101) |
| 4D4D | Q9Z4P9 | The catalytic domain, BcGH76, of Bacillus circulans Aman6 in complex with 1,6-ManIFG | ALPHA-1,6-MANNANASE (E.C.3.2.1.101) |
| 5AGD | Q9Z4P9 | An inactive (D125N) variant of the catalytic domain, BcGH76, of Bacillus circulans Aman6 in complex with alpha-1,6-mannopentaose | ALPHA-1,6-MANNANASE (E.C.3.2.1.101) |
| 4D4C | Q9Z4P9 | The catalytic domain, BcGH76, of Bacillus circulans Aman6 in complex with 1,6-ManDMJ | ALPHA-1,6-MANNANASE (E.C.3.2.1.101) |
| 1AYO | P01023 | RECEPTOR BINDING DOMAIN OF BOVINE ALPHA-2-MACROGLOBULIN | ALPHA-2-MACROGLOBULIN |
| 1JFH | P00690 | STRUCTURE OF A PANCREATIC ALPHA-AMYLASE BOUND TO A SUBSTRATE ANALOGUE AT 2.03 ANGSTROM RESOLUTION | ALPHA-AMYLASE |
| 1BSI | P04746 | HUMAN PANCREATIC ALPHA-AMYLASE FROM PICHIA PASTORIS, GLYCOSYLATED PROTEIN | ALPHA-AMYLASE |
| 2C3H | Q9KFR4 | Structure of CBM26 from Bacillus halodurans amylase in complex with maltose | ALPHA-AMYLASE G-6 |
| 2C3X | 2C3X | Structure of iodinated CBM25 from Bacillus halodurans amylase in complex with maltotetraose | ALPHA-AMYLASE G-6 |
| 2C3X | Q9KFR4 | Structure of iodinated CBM25 from Bacillus halodurans amylase in complex with maltotetraose | ALPHA-AMYLASE G-6 |
| 2C3W | 2C3W | Structure of CBM25 from Bacillus halodurans amylase in complex with maltotetraose | ALPHA-AMYLASE G-6 |
| 2C3W | Q9KFR4 | Structure of CBM25 from Bacillus halodurans amylase in complex with maltotetraose | ALPHA-AMYLASE G-6 |
| 2C3X | 2C3X | Structure of iodinated CBM25 from Bacillus halodurans amylase in complex with maltotetraose | ALPHA-AMYLASE G-6 |
| 2C3H | 2C3H | Structure of CBM26 from Bacillus halodurans amylase in complex with maltose | ALPHA-AMYLASE G-6 |
| 2C3W | Q9KFR4 | Structure of CBM25 from Bacillus halodurans amylase in complex with maltotetraose | ALPHA-AMYLASE G-6 |
| 2C3H | Q9KFR4 | Structure of CBM26 from Bacillus halodurans amylase in complex with maltose | ALPHA-AMYLASE G-6 |
| 2C3X | Q9KFR4 | Structure of iodinated CBM25 from Bacillus halodurans amylase in complex with maltotetraose | ALPHA-AMYLASE G-6 |
| 2C3W | 2C3W | Structure of CBM25 from Bacillus halodurans amylase in complex with maltotetraose | ALPHA-AMYLASE G-6 |
| 2C3H | 2C3H | Structure of CBM26 from Bacillus halodurans amylase in complex with maltose | ALPHA-AMYLASE G-6 |
| 1VIW | P56634 | TENEBRIO MOLITOR ALPHA-AMYLASE-INHIBITOR COMPLEX | ALPHA-AMYLASE, ALPHA-AMYLASE-INHIBITOR |
| 1VIW | P02873 | TENEBRIO MOLITOR ALPHA-AMYLASE-INHIBITOR COMPLEX | ALPHA-AMYLASE, ALPHA-AMYLASE-INHIBITOR |
| 1GQK | Q8VP74 | Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with glucuronic acid | ALPHA-D-GLUCURONIDASE (E.C.3.2.1.139) |
| 1GQL | Q8VP74 | Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with glucuronic acid and xylotriose | ALPHA-D-GLUCURONIDASE (E.C.3.2.1.139) |
| 1GQJ | 1GQJ | Structure of Pseudomonas cellulosa alpha-D-glucuronidase complexed with xylobiose | ALPHA-D-GLUCURONIDASE (E.C.3.2.1.139) |
| 2YFO | 2YFO | GALACTOSIDASE DOMAIN OF ALPHA-GALACTOSIDASE-SUCROSE KINASE, AGASK, in complex with galactose | ALPHA-GALACTOSIDASE-SUCROSE KINASE AGASK (E.C.3.2.1.22) |
| 1OBB | O33830 | alpha-glucosidase A, AglA, from Thermotoga maritima in complex with maltose and NAD+ | ALPHA-GLUCOSIDASE (E.C.3.2.1.20) |
| 4C91 | A7M022 | Evidence that GH115 alpha-glucuronidase activity is dependent on conformational flexibility | ALPHA-GLUCURONIDASE GH115 |
| 2C7F | 2C7F | The Structure of a family 51 arabinofuranosidase, Araf51, from Clostridium thermocellum in complex with 1,5-alpha-L-Arabinotriose. | ALPHA-L-ARABINOFURANOSIDASE (E.C.3.2.1.55) |
| 2C7F | Q4CJG5 | The Structure of a family 51 arabinofuranosidase, Araf51, from Clostridium thermocellum in complex with 1,5-alpha-L-Arabinotriose. | ALPHA-L-ARABINOFURANOSIDASE (E.C.3.2.1.55) |
| 2VRQ | O69262 | STRUCTURE OF AN INACTIVE MUTANT OF ARABINOFURANOSIDASE FROM THERMOBACILLUS XYLANILYTICUS IN COMPLEX WITH A PENTASACCHARIDE | ALPHA-L-ARABINOFURANOSIDASE (E.C.3.2.1.55) |
| 2C7F | Q4CJG5 | The Structure of a family 51 arabinofuranosidase, Araf51, from Clostridium thermocellum in complex with 1,5-alpha-L-Arabinotriose. | ALPHA-L-ARABINOFURANOSIDASE (E.C.3.2.1.55) |
| 2C7F | 2C7F | The Structure of a family 51 arabinofuranosidase, Araf51, from Clostridium thermocellum in complex with 1,5-alpha-L-Arabinotriose. | ALPHA-L-ARABINOFURANOSIDASE (E.C.3.2.1.55) |
| 2WVU | Q8A3I4 | Crystal structure of a Michaelis complex of alpha-L-fucosidase GH29 from Bacteroides thetaiotaomicron with the synthetic substrate 4- nitrophenyl-alpha-L-fucose | ALPHA-L-FUCOSIDASE |
| 2WVS | Q8A3I4 | Crystal structure of an alpha-L-fucosidase GH29 trapped covalent intermediate from Bacteroides thetaiotaomicron in complex with 2- fluoro-fucosyl fluoride using an E288Q mutant | ALPHA-L-FUCOSIDASE |
| 1NQI | P08037 | crystal structure of lactose synthase, a 1:1 complex between beta1,4-galactosyltransferase and alpha-lactalbumin in the presence of GlcNAc | ALPHA-LACTALBUMIN, BETA-1,4-GALACTOSYLTRANSFERASE (E.C.2.4.1.22, E.C.2.4.1.90, E.C.2.4.1.38) |
| 1NQI | P29752 | crystal structure of lactose synthase, a 1:1 complex between beta1,4-galactosyltransferase and alpha-lactalbumin in the presence of GlcNAc | ALPHA-LACTALBUMIN, BETA-1,4-GALACTOSYLTRANSFERASE (E.C.2.4.1.22, E.C.2.4.1.90, E.C.2.4.1.38) |
| 1HTY | Q24451 | GOLGI ALPHA-MANNOSIDASE II | ALPHA-MANNOSIDASE II (E.C.3.2.1.114) |
| 1F8Q | P16094 | CRYSTAL STRUCTURE OF ALPHA-MOMORCHARIN IN ACETONITRILE-WATER MIXTURE | ALPHA-MOMORCHARIN (E.C.3.2.2.22) |
| 2VCA | Q0TST1 | Family 89 glycoside hydrolase from Clostridium perfringens in complex with beta-N-acetyl-D-glucosamine | ALPHA-N-ACETYLGLUCOSAMINIDASE (E.C.3.2.1.50) |
| 4AAX | Q8XM24 | CpGH89CBM32-5, from Clostridium perfringens, in complex with N- acetylgalactosamine | ALPHA-N-ACETYLGLUCOSAMINIDASE (E.C.3.2.1.50) |
| 4A41 | Q0TST1 | CpGH89CBM32-5, from Clostridium perfringens, in complex with galactose | ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN (E.C.3.2.1.50) |
| 4A4A | Q0TST1 | CpGH89 (E483Q, E601Q), from Clostridium perfringens, in complex with its substrate GlcNAc-alpha-1,4-galactose | ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN (E.C.3.2.1.50) |
| 4A6O | Q0TST1 | CpGH89CBM32-4, produced by Clostridium perfringens, in complex with glcNAc-alpha-1,4-galactose | ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN (E.C.3.2.1.50) |
| 4A45 | Q0TST1 | CpGH89CBM32-5, from Clostridium perfringens, in complex with GalNAc- beta-1,3-galactose | ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN (E.C.3.2.1.50) |
| 1D3P | P00734 | CRYSTAL STRUCTURE OF HUMAN APLHA-THROMBIN IN COMPLEX WITH BENZO[B]THIOPHENE INHIBITOR 3 | ALPHA-THROMBIN (E.C.3.4.21.5) |
| 1D3P | P28501 | CRYSTAL STRUCTURE OF HUMAN APLHA-THROMBIN IN COMPLEX WITH BENZO[B]THIOPHENE INHIBITOR 3 | ALPHA-THROMBIN (E.C.3.4.21.5) |
| 1D4P | P00734 | CRYSTAL STRUCTURE OF HUMAN ALPHA THROMBIN IN COMPLEX WITH 5-AMIDINOINDOLE-4-BENZYLPIPERIDINE INHIBITOR | ALPHA-THROMBIN (E.C.3.4.21.5) |
| 1D4P | P28501 | CRYSTAL STRUCTURE OF HUMAN ALPHA THROMBIN IN COMPLEX WITH 5-AMIDINOINDOLE-4-BENZYLPIPERIDINE INHIBITOR | ALPHA-THROMBIN (E.C.3.4.21.5) |
| 1D3Q | P00734 | CRYSTAL STRUCTURE OF HUMAN ALPHA THROMBIN IN COMPLEX WITH BENZO[B]THIOPHENE INHIBITOR 2 | ALPHA-THROMBIN (E.C.3.4.21.5) |
| 1D3T | P28501 | CRYSTAL STRUCTURE OF HUMAN ALPHA THROMBIN IN COMPLEX WITH BENZO[B]THIOPHENE INHIBITOR 1 | ALPHA-THROMBIN (E.C.3.4.21.5) |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025