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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | November 28, 2024 |
| PDB ID | UniProt ID ▲ | Title | Descriptor |
|---|---|---|---|
| 2W52 | Q874E3 | 2 beta-glucans (6-O-glucosyl-laminaritriose) in both donor and acceptor sites of GH16 Laminarinase 16A from Phanerochaete chrysosporium. | PUTATIVE LAMINARINASE (E.C.3.2.1.6) |
| 2WLQ | Q874E3 | Nucleophile-disabled Lam16A mutant holds laminariheptaose (L7) in a cyclical conformation | |
| 2WNE | Q874E3 | Mutant Laminarinase 16A cyclizes laminariheptaose | PUTATIVE LAMINARINASE (E.C.3.2.1.6) |
| 6NK7 | Q88628 | Electron Cryo-Microscopy of Chikungunya in Complex with Mouse Mxra8 Receptor | E1 glycoprotein, E2 glycoprotein, Capsid protein, E3 glycoprotein, Matrix remodeling-associated protein 8 |
| 7CTH | Q88636 | Cryo-EM structure of dengue virus serotype 2 in complex with the scFv fragment of the broadly neutralizing antibody EDE1 C10 | |
| 8UFA | Q88678 | Eastern equine encephalitis virus (PE-6) VLP (asymmetric unit) | |
| 8UFB | Q88678 | Eastern equine encephalitis virus (PE-6) VLP in complex with full-length VLDLR (asymmetric unit) | |
| 8UFC | Q88678 | Eastern equine encephalitis virus (PE-6) VLP in complex with VLDLR LA(1-2) (asymmetric unit) | |
| 8UA4 | Q88678 | Structure of eastern equine encephalitis virus VLP in complex with VLDLR LA1 | |
| 8UA9 | Q88678 | Structure of eastern equine encephalitis virus VLP unliganded quasi-threefold spike protein | |
| 3K0T | Q88BE5 | Crystal structure of PSPTO -PSP protein in complex with D-beta-Glucose from Pseudomonas syringae pv. tomato str. DC3000 | Endoribonuclease L-PSP, putative |
| 3O75 | Q88PQ6 | Crystal structure of Cra transcriptional dual regulator from Pseudomonas putida in complex with fructose 1-phosphate' | |
| 3QOM | Q88ZA9 | Crystal structure of 6-phospho-beta-glucosidase from Lactobacillus plantarum | 6-phospho-beta-glucosidase (E.C.3.2.1.86) |
| 6Y6P | Q89839 | Structure of Hantaan virus envelope glycoprotein Gn | |
| 9EVM | Q89EJ6 | High pH (8.0) nitrite-bound MSOX movie series dataset 30 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [20.7 MGy] | |
| 8RUR | Q89EJ6 | High pH (8.0) nitrite-bound MSOX movie series dataset 2 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [1.38 MGy] | |
| 8R8S | Q89EJ6 | Low pH (5.5) as-isolated MSOX movie series dataset 1 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [0.57 MGy] | |
| 8RFL | Q89EJ6 | Low pH (5.5) nitrite-bound MSOX movie series dataset 1 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [0.61 MGy] - nitrite (start) | |
| 8RFO | Q89EJ6 | Low pH (pH 5.5) nitrite-bound MSOX movie series dataset 2 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [1.22 MGy] - nitrite intermediate | |
| 8RFP | Q89EJ6 | Low pH (5.5) nitrite-bound MSOX movie series dataset 3 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [1.83 MGy] - nitrite/NO intermediate | |
| 8RFQ | Q89EJ6 | Low pH (5.5) nitrite-bound MSOX movie series dataset 5 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [3.05 MGy] - nitric oxide (NO) intermediate | |
| 8RFR | Q89EJ6 | Low pH (5.5) nitrite-bound MSOX movie series dataset 7 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [4.27 MGy] - NO/water intermediate | |
| 8RFS | Q89EJ6 | Low pH (5.5) nitrite-bound MSOX movie series dataset 11 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [6.71 MGy] - water ligand | |
| 8RFT | Q89EJ6 | Low pH (5.5) nitrite-bound MSOX movie series dataset 17 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [10.37 MGy] - water ligand + decarboxylated AspCAT | |
| 8RFU | Q89EJ6 | Low pH (5.5) nitrite-bound MSOX movie series dataset 40 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [24.4 MGy] - water ligand + decarboxylated AspCAT (final) | |
| 8RU9 | Q89EJ6 | High pH (8.0) nitrite-bound MSOX movie series dataset 1 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [0.69 MGy] | |
| 8RYJ | Q89EJ6 | High pH (8.0) nitrite-bound MSOX movie series dataset 3 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [2.07 MGy] | |
| 8RYR | Q89EJ6 | High pH (8.0) nitrite-bound MSOX movie series dataset 4 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [2.76 MGy] | |
| 8RYU | Q89EJ6 | High pH (8.0) nitrite-bound MSOX movie series dataset 10 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [6.9 MGy] | |
| 8RYV | Q89EJ6 | MSOX movie series dataset 10 (11.5 MGy) for nitrite bound BrJNiR (Cu containing nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 at pH 8. | |
| 8S0W | Q89EJ6 | High pH (8.0) as-isolated MSOX movie series dataset 1 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [0.35 MGy] | |
| 8S2Q | Q89EJ6 | High pH (8.0) as-isolated MSOX movie series dataset 2 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [0.7 MGy] | |
| 8S5X | Q89EJ6 | High pH (8.0) as-isolated MSOX movie series dataset 10 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [3.5 MGy] | |
| 8S5Y | Q89EJ6 | High pH (8.0) as-isolated MSOX movie series dataset 40 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [14 MGy] | |
| 8S63 | Q89EJ6 | Low pH (5.5) as-isolated MSOX movie series dataset 3 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [1.71 MGy] | |
| 8S64 | Q89EJ6 | Low pH (5.5) as-isolated MSOX movie series dataset 10 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [5.7 MGy] | |
| 8S68 | Q89EJ6 | Low pH (5.5) as-isolated MSOX movie series dataset 20 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [11.4 MGy] | |
| 8S69 | Q89EJ6 | Low pH (5.5) as-isolated MSOX movie series dataset 40 of the copper nitrite reductase (NirK) from Bradyrhizobium japonicum USDA110 [22.8 MGy] | |
| 5JO9 | Q89FN7 | Structural characterization of the thermostable Bradyrhizobium japonicum d-sorbitol dehydrogenase | |
| 7ALL | Q89YP8 | A single sulfatase is required for metabolism of colonic mucin O-glycans and intestinal colonization by a symbiotic human gut bacterium (BT4683-S1_4) | |
| 3ILR | Q89YQ6 | Structure of Heparinase I from Bacteroides thetaiotaomicron in complex with tetrasaccharide product | |
| 6GPA | Q89YR3 | Beta-1,4-galactanase from Bacteroides thetaiotaomicron with galactose | |
| 4A2M | Q89YR8 | Structure of the periplasmic domain of the heparin and heparan sulphate sensing hybrid two component system BT4663 in apo and ligand bound forms | |
| 4AK2 | Q89YS0 | Structure of BT4661, a SusE-like surface located polysaccharide binding protein from the Bacteroides thetaiotaomicron heparin utilisation locus | |
| 5G2V | Q89YS5 | Structure of BT4656 in complex with its substrate D-Glucosamine-2-N, 6-O-disulfate. | |
| 2W4X | Q89ZI2 | BtGH84 in complex with STZ | |
| 2X0H | Q89ZI2 | BtGH84 Michaelis complex | |
| 2XM1 | Q89ZI2 | BtGH84 in complex with N-acetyl gluconolactam | |
| 2XM2 | Q89ZI2 | BtGH84 in complex with LOGNAc | |
| 5CJZ | Q89ZX5 | BT4246 with galactose |
