GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
---|---|
GlycoNAVI Proteins | November 21, 2024 |
PDB ID | UniProt ID ▲ | Title | Descriptor |
---|---|---|---|
6KAC | Q9SPI9 | Cryo-EM structure of the C2S2-type PSII-LHCII supercomplex from Chlamydomonas reihardtii | Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II reaction center protein Ycf12, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, Photosystem II reaction center protein H, Photosystem II reaction center protein I, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Oxygen-evolving enhancer protein 1, chloroplastic, Oxygen-evolving enhancer protein 2, chloroplastic, Oxygen-evolving enhancer protein 3, chloroplastic, Photosystem II reaction center protein T, Photosystem II reaction center W protein, chloroplastic, 4.1 kDa photosystem II subunit, Photosystem II reaction center protein Z, Chlorophyll a-b binding protein, chloroplastic, Chlorophyll a-b binding protein CP29, Predicted protein, 10 kDa photosystem II polypeptide PsbR (potential), Unindentified Stromal Protein (USP) |
6KAD | Q9SPI9 | Cryo-EM structure of the C2S2M2L2-type PSII-LHCII supercomplex from Chlamydomonas reihardtii | |
3U5Y | Q9SPP9 | Structures of Alkaloid Biosynthetic Glucosidases Decode Substrate Specificity | |
4ATL | Q9SPP9 | Crystal structure of Raucaffricine glucosidase in complex with Glucose | |
4EK7 | Q9SPP9 | High speed X-ray analysis of plant enzymes at room temperature | |
6ZXS | Q9SQL2 | Cold grown Pea Photosystem I | |
6ZOO | Q9SQL2 | Photosystem I reduced Plastocyanin Complex | Photosystem I P700 chlorophyll a apoprotein A1 (E.C.1.97.1.12), Photosystem I P700 chlorophyll a apoprotein A2 (E.C.1.97.1.12), Photosystem I iron-sulfur center (E.C.1.97.1.12), PsaD, Putative uncharacterized protein, Photosystem I reaction center subunit III, photosystem I reaction center, Photosystem I reaction center subunit VI, Photosystem I reaction center subunit VIII, Photosystem I reaction center subunit IX, Photosystem I reaction center subunit X psaK, PsaL domain-containing protein, Lhca1, Chlorophyll a-b binding protein, chloroplastic, Chlorophyll a-b binding protein 3, chloroplastic, Chlorophyll a-b binding protein P4, chloroplastic, Plastocyanin, chloroplastic |
6YAC | Q9SQL2 | Plant PSI-ferredoxin supercomplex | Lhca1, Chlorophyll a-b binding protein, chloroplastic, Chlorophyll a-b binding protein 3, chloroplastic, Lhca4, Photosystem I P700 chlorophyll a apoprotein A1 (E.C.1.97.1.12), Photosystem I P700 chlorophyll a apoprotein A2 (E.C.1.97.1.12), Photosystem I iron-sulfur center (E.C.1.97.1.12), PsaD, PsaE, PsaF, PsaG, PsaH, Photosystem I reaction center subunit VIII, Photosystem I reaction center subunit IX, Photosystem I reaction center subunit X psaK, PsaL, Ferredoxin-1, chloroplastic |
6YEZ | Q9SQL2 | Plant PSI-ferredoxin-plastocyanin supercomplex | Lhca1, Chlorophyll a-b binding protein, chloroplastic, Chlorophyll a-b binding protein 3, chloroplastic, Lhca4, Photosystem I P700 chlorophyll a apoprotein A1 (E.C.1.97.1.12), Photosystem I P700 chlorophyll a apoprotein A2 (E.C.1.97.1.12), Photosystem I iron-sulfur center (E.C.1.97.1.12), PsaD, PsaE, PsaF, PsaG, PsaH, Photosystem I reaction center subunit VIII, Photosystem I reaction center subunit IX, Photosystem I reaction center subunit X psaK, PsaL, Ferredoxin-1, chloroplastic |
2WSC | Q9SQL2 | Improved Model of Plant Photosystem I | AT3G54890, TYPE II CHLOROPHYLL A/B BINDING PROTEIN FROM PHOTOSYSTEM I, LHCA3, CHLOROPHYLL A-B BINDING PROTEIN P4, CHLOROPLASTIC, PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1, PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2, PHOTOSYSTEM I IRON-SULFUR CENTER, PHOTOSYSTEM I REACTION CENTER SUBUNIT II, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT VI, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT VIII, PHOTOSYSTEM I REACTION CENTER SUBUNIT IX, PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC, PHOTOSYSTEM I-N SUBUNIT |
2WSE | Q9SQL2 | Improved Model of Plant Photosystem I | AT3G54890, TYPE II CHLOROPHYLL A/B BINDING PROTEIN FROM PHOTOSYSTEM I, LHCA3, CHLOROPHYLL A-B BINDING PROTEIN P4, CHLOROPLASTIC, PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1, PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2, PHOTOSYSTEM I IRON-SULFUR CENTER, PHOTOSYSTEM I REACTION CENTER SUBUNIT II, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT VI, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT VIII, PHOTOSYSTEM I REACTION CENTER SUBUNIT IX, PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC, PHOTOSYSTEM I-N SUBUNIT |
2WSF | Q9SQL2 | Improved Model of Plant Photosystem I | AT3G54890, TYPE II CHLOROPHYLL A/B BINDING PROTEIN FROM PHOTOSYSTEM I, LHCA3, CHLOROPHYLL A-B BINDING PROTEIN P4, CHLOROPLASTIC, PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1, PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2, PHOTOSYSTEM I IRON-SULFUR CENTER, PHOTOSYSTEM I REACTION CENTER SUBUNIT II, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT VI, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT VIII, PHOTOSYSTEM I REACTION CENTER SUBUNIT IX, PHOTOSYSTEM I REACTION CENTER SUBUNIT PSAK, CHLOROPLASTIC, PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC, PHOTOSYSTEM I-N SUBUNIT |
3LW5 | Q9SQL2 | Improved model of plant photosystem I | |
4RKU | Q9SQL2 | Crystal structure of plant Photosystem I at 3 Angstrom resolution | Photosystem I P700 chlorophyll a apoprotein A1 (E.C.1.97.1.12), Photosystem I P700 chlorophyll a apoprotein A2 (E.C.1.97.1.12), Photosystem I iron-sulfur center (E.C.1.97.1.12), Photosystem I reaction center subunit II, chloroplastic, Photosystem I reaction center subunit IV B, chloroplastic, Photosystem I reaction center subunit III, chloroplastic, Photosystem I reaction center subunit V, chloroplastic, Photosystem I reaction center subunit VI, chloroplastic, Photosystem I reaction center subunit VIII, Photosystem I reaction center subunit IX, Photosystem I reaction center subunit X psaK, Photosystem I reaction center subunit XI, chloroplastic, Photosystem I-N subunit, Chlorophyll a-b binding protein 6A, chloroplastic, Type II chlorophyll a/b binding protein from photosystem I, Chlorophyll a-b binding protein 3, chloroplastic, Chlorophyll a-b binding protein P4, chloroplastic |
4Y28 | Q9SQL2 | The structure of plant photosystem I super-complex at 2.8 angstrom resolution. | photosystem I reaction center (E.C.1.97.1.12) |
5L8R | Q9SQL2 | The structure of plant photosystem I super-complex at 2.6 angstrom resolution. | Lhca1, Type II chlorophyll a/b binding protein from photosystem I, Chlorophyll a-b binding protein 3, chloroplastic, Chlorophyll a-b binding protein P4, chloroplastic, Photosystem I P700 chlorophyll a apoprotein A1 (E.C.1.97.1.12), Photosystem I P700 chlorophyll a apoprotein A2 (E.C.1.97.1.12), Photosystem I iron-sulfur center (E.C.1.97.1.12), PsaD, Putative uncharacterized protein, Photosystem I reaction center subunit III, PsaG, PsaH, Photosystem I reaction center subunit VIII, PsaJ, Photosystem I reaction center subunit X psaK |
7DKZ | Q9SQL2 | Structure of plant photosystem I-light harvesting complex I supercomplex | |
6FIG | Q9SR05 | Crystal structure of the ANX1 ectodomain from Arabidopsis thaliana | Receptor-like protein kinase ANXUR1 (E.C.2.7.11.1) |
5Y96 | Q9SR05 | Crystal structure of ANXUR1 extracellular domain from Arabidopsis thaliana | |
4KYR | Q9SRK5 | Structure of a product bound plant phosphatase | |
8WO7 | Q9SRK7 | Apo state of Arabidopsis AZG1 T440Y | |
8IRL | Q9SRK7 | Apo state of Arabidopsis AZG1 at pH 7.4 | |
8IRM | Q9SRK7 | Endogenous substrate adenine bound state of Arabidopsis AZG1 at pH 5.5 | |
8IRN | Q9SRK7 | 6-BAP bound state of Arabidopsis AZG1 | |
8IRO | Q9SRK7 | trans-Zeatin bound state of Arabidopsis AZG1 at pH7.4 | |
8IRP | Q9SRK7 | kinetin bound state of Arabidopsis AZG1 | |
8WMQ | Q9SRK7 | trans-Zeatin bound state of Arabidopsis AZG1 at pH5.5 | |
5GR8 | Q9SSL9 | Crystal structure of PEPR1-AtPEP1 | |
5GYY | Q9ST12 | Plant receptor complex | S-receptor kinase SRK9, S-locus protein 11 |
7SBD | Q9STB6 | Murine Fab/IgE in complex with profilin from Hevea brasieliensis (Hev b 8) | |
7SBG | Q9STB6 | Murine Fab/IgE in complex with profilin from Hevea brasieliensis (Hev b 8) | |
2X2I | Q9STC1 | Crystal structure of the Gracilariopsis lemaneiformis alpha-1,4- glucan lyase with acarbose | |
4AMW | Q9STC1 | CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-idosyl- fluoride | |
4AMX | Q9STC1 | CRYSTAL STRUCTURE OF THE GRACILARIOPSIS LEMANEIFORMIS ALPHA-1,4- GLUCAN LYASE Covalent Intermediate Complex with 5-fluoro-glucosyl- fluoride | |
7EAW | Q9SU50 | Trehalase of Arabidopsis thaliana acid mutant -D380A trehalose complex | |
7XEY | Q9SU72 | EDS1-PAD4 complexed with pRib-ADP | |
7WFD | Q9SUI4 | Left PSI in the cyclic electron transport supercomplex NDH-PSI from Arabidopsis | |
7WFE | Q9SUI4 | Right PSI in the cyclic electron transfer supercomplex NDH-PSI from Arabidopsis | |
7WG5 | Q9SUI4 | Cyclic electron transport supercomplex NDH-PSI from Arabidopsis | |
8J6Z | Q9SUI4 | Cryo-EM structure of the Arabidopsis thaliana photosystem I(PSI-LHCII-ST2) | |
8J7A | Q9SUI4 | Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 1 (PSI-ST1) | |
8J7B | Q9SUI4 | Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 2 (PSI-ST2) | |
7WFD | Q9SUI5 | Left PSI in the cyclic electron transport supercomplex NDH-PSI from Arabidopsis | |
7WFE | Q9SUI5 | Right PSI in the cyclic electron transfer supercomplex NDH-PSI from Arabidopsis | |
7WG5 | Q9SUI5 | Cyclic electron transport supercomplex NDH-PSI from Arabidopsis | |
8J6Z | Q9SUI5 | Cryo-EM structure of the Arabidopsis thaliana photosystem I(PSI-LHCII-ST2) | |
8J7A | Q9SUI5 | Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 1 (PSI-ST1) | |
8J7B | Q9SUI5 | Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 2 (PSI-ST2) | |
7WFD | Q9SUI6 | Left PSI in the cyclic electron transport supercomplex NDH-PSI from Arabidopsis | |
7WFE | Q9SUI6 | Right PSI in the cyclic electron transfer supercomplex NDH-PSI from Arabidopsis |
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
GlyCosmos Portal v4.0.0
Last updated: August 19, 2024