GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
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GlycoNAVI Proteins | November 21, 2024 |
PDB ID | UniProt ID | Title | Descriptor ▼ |
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6PCI | A0A0F6PDW0 | EBOV GPdMuc (Makona) in complex with rEBOV-520 and rEBOV-548 Fabs | Virion spike glycoprotein, rEBOV-548 Fab HC, rEBOV-548 Fab LC, Virion spike glycoprotein,Ebola Virus (Makona) GP2, rEBOV-520 Fab LC, rEBOV-520 Fab HC |
6PCI | 6PCI | EBOV GPdMuc (Makona) in complex with rEBOV-520 and rEBOV-548 Fabs | Virion spike glycoprotein, rEBOV-548 Fab HC, rEBOV-548 Fab LC, Virion spike glycoprotein,Ebola Virus (Makona) GP2, rEBOV-520 Fab LC, rEBOV-520 Fab HC |
6PCI | A0A0F6PDW0 | EBOV GPdMuc (Makona) in complex with rEBOV-520 and rEBOV-548 Fabs | Virion spike glycoprotein, rEBOV-548 Fab HC, rEBOV-548 Fab LC, Virion spike glycoprotein,Ebola Virus (Makona) GP2, rEBOV-520 Fab LC, rEBOV-520 Fab HC |
7KFH | A0A1C4HDV6 | Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-437 | Virion spike glycoprotein, Antibody Fab heavy chain (HC) BDBV-289, Antibody Fab light chain (LC) BDBV-289 |
7KFH | A0A0E3XK95 | Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-437 | Virion spike glycoprotein, Antibody Fab heavy chain (HC) BDBV-289, Antibody Fab light chain (LC) BDBV-289 |
7KFH | 7KFH | Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-437 | Virion spike glycoprotein, Antibody Fab heavy chain (HC) BDBV-289, Antibody Fab light chain (LC) BDBV-289 |
7KEJ | A0A1C4HDV6 | BDBV-289 bound to EBOV GPdMuc Makona | Virion spike glycoprotein, Antibody Fab heavy chain (HC) BDBV-289, Antibody Fab light chain (LC) BDBV-289 |
7KEJ | A0A0E3XK95 | BDBV-289 bound to EBOV GPdMuc Makona | Virion spike glycoprotein, Antibody Fab heavy chain (HC) BDBV-289, Antibody Fab light chain (LC) BDBV-289 |
7KEJ | 7KEJ | BDBV-289 bound to EBOV GPdMuc Makona | Virion spike glycoprotein, Antibody Fab heavy chain (HC) BDBV-289, Antibody Fab light chain (LC) BDBV-289 |
7KFB | A0A1C4HDV6 | Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-442 | Virion spike glycoprotein 1, Antibody Fab EBOV-442 heavy chain, Antibody Fab EBOV-442 light chain, Virion spike glycoprotein 2 |
7KFB | A0A0E3XK95 | Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-442 | Virion spike glycoprotein 1, Antibody Fab EBOV-442 heavy chain, Antibody Fab EBOV-442 light chain, Virion spike glycoprotein 2 |
7KFB | 7KFB | Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-442 | Virion spike glycoprotein 1, Antibody Fab EBOV-442 heavy chain, Antibody Fab EBOV-442 light chain, Virion spike glycoprotein 2 |
6FI2 | A0A160EBC2 | VexL: A periplasmic depolymerase provides new insight into ABC transporter-dependent secretion of bacterial capsular polysaccharides | VexL |
1OP2 | Q9I8X1 | Crystal Structure of AaV-SP-II, a Glycosylated Snake Venom Serine Proteinase from Agkistrodon acutus | Venom serine proteinase(E.C.3.4.21.-) |
7CBA | A0A2D0TC04 | Crystal structure of snake venom phosphodiesterase (PDE) from Taiwan cobra (Naja atra atra) in complex with isorhamnetin and citrate | Venom phosphodiesterase (E.C.3.6.1.-) |
2GNN | P52584 | Crystal Structure of the Orf Virus NZ2 Variant of VEGF-E | Vascular endothelial growth factor homolog |
5T89 | P15692 | Crystal structure of VEGF-A in complex with VEGFR-1 domains D1-6 | Vascular endothelial growth factor A, Vascular endothelial growth factor receptor 1 (E.C.2.7.10.1) |
5T89 | P17948 | Crystal structure of VEGF-A in complex with VEGFR-1 domains D1-6 | Vascular endothelial growth factor A, Vascular endothelial growth factor receptor 1 (E.C.2.7.10.1) |
6Z79 | A0A291L8F4 | Variant Surface Glycoprotein VSGsur, I3C ("Magic Triangle") derivative used for phasing of the structure and subsequently as a model for molecular replacement of native, mutants, and drug soaks. | Variant surface glycoprotein Sur |
6Z8G | Q58NS4 | Crystal structure of VSG13 soaked in 0.5 M used to phase VSG13 to solve the structure. | Variant surface glycoprotein MITat 1.13 |
7C4U | 7C4U | MicroED structure of orthorhombic Vancomycin at 1.2 A resolution | Vancomycin |
6CDI | Q2N0S5 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | VRC03 Heavy Chain, VRC03 light chain, PGT122 Heavy Chain, PGT122 Light Chain, Glycoprotein 120, Glycoprotein gp41, vFP16.02 Heavy Chain, vFP16.02 Light Chain |
6CDI | 6CDI | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | VRC03 Heavy Chain, VRC03 light chain, PGT122 Heavy Chain, PGT122 Light Chain, Glycoprotein 120, Glycoprotein gp41, vFP16.02 Heavy Chain, vFP16.02 Light Chain |
6CDI | Q2N0S7 | Cryo-EM structure at 3.6 A resolution of vaccine-elicited antibody vFP16.02 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | VRC03 Heavy Chain, VRC03 light chain, PGT122 Heavy Chain, PGT122 Light Chain, Glycoprotein 120, Glycoprotein gp41, vFP16.02 Heavy Chain, vFP16.02 Light Chain |
4FMH | C0JPK1 | Merkel Cell Polyomavirus VP1 in complex with Disialyllactose | VP1 |
4FMI | C0JPK1 | Merkel cell polyomavirus VP1 in complex with 3'-sialyllactosamine | VP1 |
4FMJ | C0JPK1 | Merkel cell polyomavirus VP1 in complex with GD1a oligosaccharide | VP1 |
6H9V | B5BTR7 | Crystal structure of deaminated P domain from norovirus strain Saga GII-4 in complex with Fuc | VP1 |
1FE8 | P04275 | CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR A3 DOMAIN IN COMPLEX WITH A FAB FRAGMENT OF IGG RU5 THAT INHIBITS COLLAGEN BINDING | VON WILLEBRAND FACTOR |
1FE8 | 1FE8 | CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR A3 DOMAIN IN COMPLEX WITH A FAB FRAGMENT OF IGG RU5 THAT INHIBITS COLLAGEN BINDING | VON WILLEBRAND FACTOR |
4BSJ | P35916 | Crystal structure of VEGFR-3 extracellular domains D4-5 | VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 3 (E.C.2.7.10.1) |
2X1W | 2X1W | Crystal Structure of VEGF-C in Complex with Domains 2 and 3 of VEGFR2 | VASCULAR ENDOTHELIAL GROWTH FACTOR C, VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2 |
2X1W | P49767 | Crystal Structure of VEGF-C in Complex with Domains 2 and 3 of VEGFR2 | VASCULAR ENDOTHELIAL GROWTH FACTOR C, VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2 |
2X1W | 2X1W | Crystal Structure of VEGF-C in Complex with Domains 2 and 3 of VEGFR2 | VASCULAR ENDOTHELIAL GROWTH FACTOR C, VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2 |
2X1W | P49767 | Crystal Structure of VEGF-C in Complex with Domains 2 and 3 of VEGFR2 | VASCULAR ENDOTHELIAL GROWTH FACTOR C, VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2 |
2X1W | P35968 | Crystal Structure of VEGF-C in Complex with Domains 2 and 3 of VEGFR2 | VASCULAR ENDOTHELIAL GROWTH FACTOR C, VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2 |
2X1W | P35968 | Crystal Structure of VEGF-C in Complex with Domains 2 and 3 of VEGFR2 | VASCULAR ENDOTHELIAL GROWTH FACTOR C, VASCULAR ENDOTHELIAL GROWTH FACTOR RECEPTOR 2 |
1VSG | P26332 | 2.9 ANGSTROMS RESOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF A VARIANT SURFACE GLYCOPROTEIN FROM TRYPANOSOMA BRUCEI | VARIANT SURFACE GLYCOPROTEIN (N-TERMINAL DOMAIN) |
1SHO | NOR00681 | CRYSTAL STRUCTURE OF VANCOMYCIN AT ATOMIC RESOLUTION | VANCOMYCIN |
6XBY | P31404 | Cryo-EM structure of V-ATPase from bovine brain, state 2 | V-type proton ATPase catalytic subunits |
6XBY | P31408 | Cryo-EM structure of V-ATPase from bovine brain, state 2 | V-type proton ATPase catalytic subunits |
6XBY | P21282 | Cryo-EM structure of V-ATPase from bovine brain, state 2 | V-type proton ATPase catalytic subunits |
6XBY | A0A3Q1M4W9 | Cryo-EM structure of V-ATPase from bovine brain, state 2 | V-type proton ATPase catalytic subunits |
6XBY | P11019 | Cryo-EM structure of V-ATPase from bovine brain, state 2 | V-type proton ATPase catalytic subunits |
6XBY | Q28029 | Cryo-EM structure of V-ATPase from bovine brain, state 2 | V-type proton ATPase catalytic subunits |
6XBY | Q0VCV6 | Cryo-EM structure of V-ATPase from bovine brain, state 2 | V-type proton ATPase catalytic subunits |
6XBY | F1MZL6 | Cryo-EM structure of V-ATPase from bovine brain, state 2 | V-type proton ATPase catalytic subunits |
6XBY | F1MJV0 | Cryo-EM structure of V-ATPase from bovine brain, state 2 | V-type proton ATPase catalytic subunits |
6XBY | Q2TA24 | Cryo-EM structure of V-ATPase from bovine brain, state 2 | V-type proton ATPase catalytic subunits |
6XBY | P23956 | Cryo-EM structure of V-ATPase from bovine brain, state 2 | V-type proton ATPase catalytic subunits |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: August 19, 2024