GlycoParaDB

Glyco-enzyme reaction parameters estimated using Simulated Annealing via GlycoSim. The ranges of values for Km and Kmd that best matched experimental data are listed. The Parameter Estimation method has been described in this article.

Displaying entries 11 - 20 of 880 in total
Enzyme Gene ID Uniprot ID Substrate ID BRENDA Cazy family Km_max Km_min Kmd_max Kmd_min taxonomyID ▲ cell Rhea CHEBI
polypeptide N-acetylgalactosaminyltransferase 241391 Q8C102
G11457RF
2.4.1.41 GT27
  • 2.16
  • 9.882
  • 0
  • 0
10090 ES cell
mannosyl-oligosaccharide 1,2-alpha-mannosidase Q8K2N2
G11457RF
3.2.1.113 GH47
  • 0.05728
  • 0.08232
  • 0.2545
  • 0.01582
  • 0.01686
  • 0.1335
  • 0
  • 0
10090 ES cell
glycoprotein endo-alpha-1,2-mannosidase 242362 Q6NXH2
G65562ZE
3.2.1.130 GH99
  • 97.22
  • 36.24
  • 0
  • 0
10090 ES cell
Beta-1,4-galactosyltransferase 1 14595 P15535
G82942ZJ
2.4.1.38 GT7
  • 0.00345
  • 0.7139
  • 0.009193
  • 9.185
  • 0
  • 0
10090 ES cell
polypeptide N-acetylgalactosaminyltransferase 14426 O08832
G36123IU
2.4.1.41 GT27
  • 2.16
  • 9.882
  • 0
  • 0
10090 ES cell
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 50935 Q9JM95
G61751GZ
2.4.3.3 GT29
  • 0.002666
  • 0.005352
  • 1.375
  • 0.00909
  • 0.04012
  • 9.992
  • 0
  • 0
10090 ES cell
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 50935 Q9JM95
G11457RF
2.4.3.3 GT29
  • 0.002666
  • 0.005352
  • 1.375
  • 0.00909
  • 0.04012
  • 9.992
  • 0
  • 0
10090 ES cell
glycoprotein endo-alpha-1,2-mannosidase 242362 Q6NXH2
G46748BU
3.2.1.130 GH99
  • 97.22
  • 36.24
  • 0
  • 0
10090 ES cell
polypeptide N-acetylgalactosaminyltransferase 14425 P70419
G89864BN
2.4.1.41 GT27
  • 2.16
  • 9.882
  • 0
  • 0
10090 ES cell
mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase 17158 P27046
G89864BN
3.2.1.114 GH38
  • 0.001911
  • 0.004547
  • 0.00109
  • 0.001443
  • 0
  • 0
10090 ES cell

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Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: February 17, 2025