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Standards Ontologies Notations
Nidogen-2

Summary
UniProt ID
B5DFC9
Gene Symbol
  • Nid2
Organism
Rattus norvegicus (Norway rat)
GlyGen
B5DFC9
PubChem
B5DFC9
Annotation
Keyword
  • Alternative splicing
  • Basement membrane
  • Calcium
  • Cell adhesion
  • Disulfide bond
  • EGF-like domain
  • Methylation
  • Proteoglycan
  • Reference proteome
  • Repeat
  • Signal
Gene Ontology (GO)
Displaying 1 entry
GO Term
cell-matrix adhesion
Displaying 1 entry
GO Term
calcium ion binding
Annotation information from UniProt.
Sequence
MSWDPTAGRLAPPSPLSLLLVLVLLSRVGALRPEELFPYGESWGDRLLPEGDDESSAAVKLAVPLRFYDAQFSNLYVGTNGIISTQDFPRETQYVDDDFPTDFPAIAPFLADIDTSHSRGRILYREDTSQAVLSLAARYVRTGFPLTGSSFTPTHAFLATWEHVGAYEEVRRGAAPSGELNTFQAVLASDESDTYALFLYPANGLQFFGTRPKESYNVQLQLPARVGFCRGEADDLKREALYFSLTNTEQSVKNLYQLSNLGIPGAWAFHIGSRLALDNVRPATVGGDHSTARSSALEHSFNHAAALESYTEDSFDYYNENEEDVEYPPIEPGEALEGHSRIDVSFNSEVNPTSPDSDHASPLPHPAPGNWPSYRETESASLDPQTKQGPPVGEVEVLDFKDPAELLDQTGTRTPAPPGADAAFLTPGREDLGNRDTQSYPEARPVPSEPDVPVAPLEREILPNYPESGHVPPLSGGRYVVGLEDHVSSKDQVFTYNGANRETCEHSHGQCSRHAFCTDYTTGFCCHCQSRFYGNGRHCVPEGAPHRVNGKVSGHLQVGHMPVHFTDVDLHAYIVSNDGRAYTAISQIPQPAAQALLPVLPIGGLFGWLFALEKPGSENGFSLTGATFVHDVEVTFHPGEERVRITQTAEGLDPENYLSLNTNIEGQVPFIPANFTAHIAPYQEFYHHRDSVVTSSSSRSFSLISGSINQTRSYRIDQNITYKACSHAPRHLAVPATQQLTVDRAFALYSEEEGVLRFAVTNQIGPVEVDSAPTAVNPCYDGSHTCDTTARCHPGTGVDYTCECTPGFQGDGRSCVDVNECATGFHRCGPNSVCVNLVGSYRCECRSGYEFADDRHTCVLIAPPPNPCLDGSHTCAPEGQARCIHHGGSSFSCACLPGFVGTGHQCSDVDECAENRCHGAAICYNTPGSFSCRCQPGYHGDGFHCASDTVPEDSISGLKPCEYQQRYAQAQHAHAGSRIHIPQCDDQGNFVPLQCHGSTGFCWCVDQNGHEVPGTQTPPGSTPPHCGPPPEPTQRPRTVCERWRESLLEHYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGRELPGTRSQPGTMPACIPTVAPPVVRPTPRPDVTPPAVGTFLLYAQGQQIGHLPLNGSRLQKDAARTLLSLHGSIVVGIDYDCRERMVYWTDVAGRTISRASLEAGAEPETIITSGLISPEGLAIDHFRRTMYWTDSGLDKIERAGLDGSERKVLFHTDLVNPRAITVDPIRGNLYWTDWNREAPKIETSSLDGENRRILINKDIGLPNGLTFDPFSKLLCWADAGTKKLECTLPDGTGRRVIQNHLNYPFSVVSYADHFYHTDWRRDGVISVSKDSGQLTDEYLPEQRSHLYGITAVYPYCPTGRK
  • N : N-glycosylation Site
  • ___ : Potential Sequon
Glycosylation Sites
Displaying all 6 entries
Position Description PubMed ID GlyTouCan ID Source
379 O-linked (Xyl...) (chondroitin sulfate) serine
468 O-linked (Xyl...) (chondroitin sulfate) serine
674 N-linked (GlcNAc...) asparagine
719 N-linked (GlcNAc...) asparagine
1022
1117
Feature
  • ProtVista GlyGen : Glycosylation Site from GlyGen
  • ProtVista UniProt : Glycosylation Site from UniProt
Pathway
Displaying 1 entry
Pathway Name Organism
Laminin interactions Rattus norvegicus
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International Collaboration

GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01

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Last updated: December 9, 2024