Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Pectate lyase B
Summary
- UniProt ID
- G2X3Y1
- Gene Symbol
-
- VDAG_04718
- Organism
- Verticillium dahliae VdLs.17
External Links
Annotation
- Keyword
-
- 3D-structure
- Calcium
- Lyase
- Metal-binding
- Polysaccharide degradation
- Reference proteome
- Secreted
- Signal
- Gene Ontology (GO)
| GO Term |
|---|
| polysaccharide catabolic process |
| GO Term |
|---|
| extracellular region |
| GO Term |
|---|
| metal ion binding |
| pectate lyase activity |
Sequence
MKFSNVLNLALLGFATATPTPTIQEDGSPALIAKRASVTESCNIGYASTNGGTTGGKGGATTTVSTLAQFTKAAESSGKLNIVVKGKISGGAKVRVQSDKTIIGQKGSELVGTGLYINKVKNVIVRNMKISKVKDSNGDAIGIQASKNVWVDHCDLSSDLKSGKDYYDGLLDITHGSDWVTVSNTFLHDHFKASLIGHTDSNAKEDKGKLHVTYANNYWYNVNSRNPSVRFGTVHIYNNYYLEVGSSAVNTRMGAQVRVESTVFDKSTKNGIISVDSKEKGYATVGDISWGSSTNTAPKGTLGSSNIPYSYNLYGKNNVKARVYGTAGQTLGF
Glycosylation Sites
| Position | Description | PubMed ID | GlyTouCan ID | Source |
|---|---|---|---|---|
| 39 | O-linked (Man...) threonine |
|
||
| 61 | Mannose 2 |
|
||
| 62 | Mannose 3 |
|
||
| 63 | O-linked (Man...) threonine |
|
||
| 65 | Mannose 5 |
|
||
| 69 | Mannose 5 |
|
||
| 71 | Mannose 6 |
|
||
| 85 | Mannose 5 |
|
||
| 105 | Mannose 4 |
|
Feature
: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt
