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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
Syndecan-1
Summary
- UniProt ID
- Q08DZ5
- Gene Symbol
-
- SDC1
- Organism
- Bos taurus (cattle)
External Links
- PubChem
- Q08DZ5
Annotation
- Keyword
-
- Heparan sulfate
- Phosphoprotein
- Reference proteome
- Secreted
- Signal
- Transmembrane helix
- Gene Ontology (GO)
| GO Term |
|---|
| cell migration |
| GO Term |
|---|
| extracellular region |
| membrane |
| cell surface |
Sequence
MRRAALWLWLCALALRLQPALLHSVAVNMPPEDQDGSGDDSDNFSGSGAGALPDITSSHTPSTWKDLGPVTTTATAPEPTSPDAIAASTTILPTGEQPEGGRAVLLAEVEPGLTAQKEATHPPSETTLHPTTHSVSTARATMAPGPATSHPHRDVQPDHHETSAPTGRGRMEPHRPHVEEGGPPATEKAAEEDPSTQIPVGEGSGEQDFTFDLSGENAAGAAGEPGSRNGAPEDPEATGATGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA
Glycosylation Sites
| Position | Description | PubMed ID | GlyTouCan ID | Source |
|---|---|---|---|---|
| 37 | O-linked (Xyl...) (chondroitin sulfate) serine |
|
||
| 43 | N-linked (GlcNAc...) asparagine |
|
||
| 45 | O-linked (Xyl...) (heparan sulfate) serine |
|
||
| 47 | O-linked (Xyl...) (heparan sulfate) serine |
|
||
| 204 | O-linked (Xyl...) (chondroitin sulfate) serine |
|
||
| 214 | O-linked (Xyl...) (chondroitin sulfate) serine |
|
Feature
: Glycosylation Site from GlyGen
: Glycosylation Site from UniProt
Pathway
| Pathway Name | Organism |
|---|---|
| A tetrasaccharide linker sequence is required for GAG synthesis | Bos taurus |
| Cell surface interactions at the vascular wall | Bos taurus |
| HS-GAG biosynthesis | Bos taurus |
| HS-GAG degradation | Bos taurus |
| Other interleukin signaling | Bos taurus |
| Retinoid metabolism and transport | Bos taurus |
| Syndecan interactions | Bos taurus |
