MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule | Molecule Name | Molecule Species | Partner ▼ | Partner Name | Partner Species |
|---|---|---|---|---|---|
| P36897-1 | Tgfbr1 | Homo sapiens | P37173-2 | TGFBR2 | Homo sapiens |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | P36544 | Chrna7 | Homo sapiens |
| GAG_6 | Chondroitin Sulfate D | P36363 | FGF7 | Mus musculus | |
| PFRAG_16_human | LG3 | Homo sapiens | P35968 | kdr | Homo sapiens |
| PFRAG_6_human | Endorepellin | Homo sapiens | P35968 | kdr | Homo sapiens |
| GAG_1 | Heparin | P35952 | Ldlr | Rattus norvegicus | |
| PFRAG_67_human | Peptidyl-prolyl cis-trans isomerase B | Homo sapiens | P35565 | Canx | Rattus norvegicus |
| PFRAG_95_mouse | CTF1-alpha | Mus musculus | P35564 | Canx | Mus musculus |
| GAG_1 | Heparin | P35556 | Fbn2 | Homo sapiens | |
| GAG_1 | Heparin | P35555 | FBN1 | Homo sapiens | |
| Q96RS6-3 | NUDCD1 | Homo sapiens | P35228-2 | Nos2 | Homo sapiens |
| P07602-1 | PSAP | Homo sapiens | P35030-3 | PRSS3 | Homo sapiens |
| CAT_2 | Copper | P33072 | Lox | Bos taurus | |
| PFRAG_52_human | Insulin receptor subunit beta | Homo sapiens | P31939 | Atic | Homo sapiens |
| GAG_1 | Heparin | P31722 | C1qc | Rattus norvegicus | |
| PFRAG_13_human | Beta-amyloid peptide 1-40 | Homo sapiens | P31696 | AGRN | Gallus gallus |
| GAG_1 | Heparin | P31392 | Gpr182 | Rattus norvegicus | |
| GAG_1 | Heparin | P31211 | SERPINA6 | Rattus norvegicus | |
| GAG_1 | Heparin | P31044 | Pebp1 | Rattus norvegicus | |
| GAG_1 | Heparin | P30904 | MIF | Rattus norvegicus | |
| GAG_1 | Heparin | P29975 | AQP1 | Rattus norvegicus | |
| GAG_1 | Heparin | P28799 | Grn | Homo sapiens | |
| Q96JN8-2 | Neurl4 | Homo sapiens | P28749-2 | Rbl1 | Homo sapiens |
| PFRAG_95_mouse | CTF1-alpha | Mus musculus | P28663 | Napb | Mus musculus |
| MULT_3_rat | Collagen-I | Rattus norvegicus | P28300 | Lox | Homo sapiens |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025