MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule | Molecule Name | Molecule Species | Partner | Partner Name | Partner Species |
|---|---|---|---|---|---|
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | GAG_4 | Chondroitin Sulfate A | |
| PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens | GAG_9 | Hyaluronan | |
| PFRAG_1_human | Endostatin | Homo sapiens | GAG_1 | Heparin | |
| PFRAG_1_human | Endostatin | Homo sapiens | GAG_2 | Heparan sulfate | |
| PFRAG_1_human | Endostatin | Homo sapiens | GAG_3 | Dermatan Sulfate | |
| PFRAG_1_human | Endostatin | Homo sapiens | GAG_4 | Chondroitin Sulfate A | |
| PFRAG_1_human | Endostatin | Homo sapiens | LIP_1 | Glycolipid Sulfatide | |
| PFRAG_1_mouse | Endostatin | Mus musculus | GAG_1 | Heparin | |
| PFRAG_1_mouse | Endostatin | Mus musculus | LIP_1 | Glycolipid Sulfatide | |
| PFRAG_3_mouse | NC1-XVIII | Mus musculus | GAG_1 | Heparin | |
| PFRAG_3_mouse | NC1-XVIII | Mus musculus | LIP_1 | Glycolipid Sulfatide | |
| PFRAG_6_human | Endorepellin | Homo sapiens | CAT_3 | Calcium | |
| PFRAG_6_mouse | Endorepellin | Mus musculus | GAG_1 | Heparin | |
| PFRAG_6_mouse | Endorepellin | Mus musculus | LIP_1 | Glycolipid Sulfatide | |
| PFRAG_75_human | Lymphotactin | Homo sapiens | GAG_1 | Heparin | |
| P38567 | Spam1 | Homo sapiens | GAG_9 | Hyaluronan | |
| Q5E9Z2 | Habp2 | Bos taurus | GAG_9 | Hyaluronan | |
| P21707 | Syt1 | Rattus norvegicus | CAT_2 | Copper | |
| Q91V88 | Npnt | Mus musculus | GAG_1 | Heparin | |
| Q91V88 | Npnt | Mus musculus | GAG_2 | Heparan sulfate | |
| P08587 | Tgm2 | GAG_1 | Heparin | ||
| P08587 | Tgm2 | GAG_2 | Heparan sulfate | ||
| GAG_1 | Heparin | SMALLMOL_2 | 1,3-dimethyl-2-[2-oxopropyl thio]imidazolium chloride | ||
| GAG_1 | Heparin | SPEP_1 | Boc-DON-Gln-Ile-Val-OMe | ||
| Q05819 | GAG_1 | Heparin |
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Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025