MatrixDB is a freely available database focused on interactions established by extracellular matrix proteins, proteoglycans and polysaccharides
| Source | Last Updated |
|---|---|
| MatrixDB | May 10, 2022 |
| Molecule | Molecule Name ▲ | Molecule Species | Partner | Partner Name | Partner Species |
|---|---|---|---|---|---|
| P08587 | Tgm2 | GAG_1 | Heparin | ||
| P08587 | Tgm2 | GAG_2 | Heparan sulfate | ||
| P07996 | Thbs1 | Homo sapiens | MULT_3_human | Collagen-I | Homo sapiens |
| P07996 | Thbs1 | Homo sapiens | MULT_7_VAR1_bovine | Collagen-XI v1 | Bos taurus |
| P07996 | Thbs1 | Homo sapiens | MULT_8_human | Collagen-VI | Homo sapiens |
| P07996 | Thbs1 | Homo sapiens | PFRAG_12_human | Beta-amyloid peptide 1-42 | Homo sapiens |
| P07996 | Thbs1 | Homo sapiens | PFRAG_1_human | Endostatin | Homo sapiens |
| P07996 | Thbs1 | Homo sapiens | PFRAG_3_human | NC1-XVIII | Homo sapiens |
| P07996 | Thbs1 | Homo sapiens | GAG_1 | Heparin | |
| P07996 | Thbs1 | Homo sapiens | GAG_2 | Heparan sulfate | |
| P07996 | Thbs1 | Homo sapiens | GAG_3 | Dermatan Sulfate | |
| P07996 | Thbs1 | Homo sapiens | GAG_4 | Chondroitin Sulfate A | |
| MULT_57_human | Thrombospondin-1 | Homo sapiens | P07214 | SPARC | Mus musculus |
| MULT_57_human | Thrombospondin-1 | Homo sapiens | P14210 | Hgf | Homo sapiens |
| MULT_57_human | Thrombospondin-1 | Homo sapiens | P08311 | Ctsg | Homo sapiens |
| MULT_57_human | Thrombospondin-1 | Homo sapiens | MULT_57_human | Thrombospondin-1 | Homo sapiens |
| MULT_57_human | Thrombospondin-1 | Homo sapiens | P13213 | SPARC | Bos taurus |
| P16035 | Timp2 | Homo sapiens | PFRAG_10_human | PEX | Homo sapiens |
| Q99727 | Timp4 | Homo sapiens | PFRAG_10_human | PEX | Homo sapiens |
| P98066 | Tnfaip6 | Homo sapiens | GAG_9 | Hyaluronan | |
| Q9Y6Q6 | Tnfrsf11a | Homo sapiens | PFRAG_26_human | Tumor necrosis factor ligand superfamily member 11, soluble form | Homo sapiens |
| P19438-1 | Tnfrsf1a | Homo sapiens | P19438-1 | Tnfrsf1a | Homo sapiens |
| P19438 | Tnfrsf1a | Homo sapiens | PFRAG_46_human | Tumor necrosis factor, soluble form | Homo sapiens |
| P20333 | Tnfrsf1b | Homo sapiens | PFRAG_46_human | Tumor necrosis factor, soluble form | Homo sapiens |
| O35235-1 | Tnfsf11 | Mus musculus | O35235-1 | Tnfsf11 | Mus musculus |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: December 8, 2025